Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1965 ATGGCCTCCTCTGCAACAGACGATAACCAACGATCTGCAAAAAGAGTAGCTGTTGTTGGTGCCGGGGTAAGTGGGCTTGCTGCGGCTTACAAATTGAAATCACATGGTCTGGATGTCACTGTATTTGAAGCTGAGGGAAGAGCTGGAGGGAGGTTAAGAAGTGTTTCTCGGGATGGTCTAATTTGGGATGAGGGAGCTAATACAATGACTGAAAGTGAAATTGAGGTTAAAGATTTGATTGAGGCTCTTGGACTTCAAGAAAAGCAACAATTTCCAATATCACAGCATAAGCGCTATATTGTGAAAAATGGGGCACCAGTTCTGgtaCCCACAAATCCTGCTGCATTACTCAAGAGCAAACTTCTTTCTGCACAATCAAAGATCCAGGTCATTTTTGAACCATTTATGTGGAAAAGAAGTGACCCCTCTAATGTGTGTGATGAAAATTCTGAGGAAAGTGTTGGCAGGTTCTTTGAACGTCATTTTGGGAAAGAGGTTGTGGACTATCTGATTGATCCTCTTGTTGGAGGCACTAGTGCAGCAGATCCTGAATCTCTTTCTATGCGCCATTCTTTCCCAGAGCTATGGAATTTGGAGAAAAGGTTTGGCTCCATTATAGCTGGGGCTTTGCAATCTAAGTTATTTGCCAAAAGGGACAAAACTGGAGAAAATAAGGCCGCACTAaggaaaaacaaacataagCGTGGTTCATTTTCTTTCCATGGTGGGATGCAGACACTGACAGATACATTGTGCAAAGAGCTTGGCAAAGATGACCTTAAATTAAATGCAAAGGTTTTGACATTAGCTTATGGTCATGATGGAAGTTCCTCATCACAAAACTGGTCTATTACTTGTGCTTCTAACCAAAGAACACAAGATGTTGATGCAGTAATCATGACGgCTCCTCTATAA 915 0.412 MASSATDDNQRSAKRVAVVGAGVSGLAAAYKLKSHGLDVTVFEAEGRAGGRLRSVSRDGLIWDEGANTMTESEIEVKDLIEALGLQEKQQFPISQHKRYIVKNGAPVLVPTNPAALLKSKLLSAQSKIQVIFEPFMWKRSDPSNVCDENSEESVGRFFERHFGKEVVDYLIDPLVGGTSAADPESLSMRHSFPELWNLEKRFGSIIAGALQSKLFAKRDKTGENKAALRKNKHKRGSFSFHGGMQTLTDTLCKELGKDDLKLNAKVLTLAYGHDGSSSSQNWSITCASNQRTQDVDAVIMTAPL 304
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1965 304 PANTHER PROTOPORPHYRINOGEN OXIDASE 12 304 - -
Ssu4g1965 304 SUPERFAMILY FAD/NAD(P)-binding domain 12 304 IPR036188 -
Ssu4g1965 304 Pfam Flavin containing amine oxidoreductase 23 304 IPR002937 GO:0016491
Ssu4g1965 304 PANTHER PROTOPORPHYRINOGEN OXIDASE 12 304 - -
Ssu4g1965 304 TIGRFAM proto_IX_ox: protoporphyrinogen oxidase 14 303 IPR004572 GO:0004729|GO:0006779
Ssu4g1965 304 Gene3D - 13 304 IPR036188 -
Ssu4g1965 304 PRINTS Adrenodoxin reductase family signature 15 37 - -
Ssu4g1965 304 PRINTS Adrenodoxin reductase family signature 38 51 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu4g1965 Ssu-Chr4 37424670 37434449 Proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1965 K00231 - gmx:547941 555.058