Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1954 ATGGGTTCGTGTTCCTCCGTGCACAGAAACCAGCAAGCCAACATGAAGCACCTCACGCTCTCGTTCGAGTCCAAACCCGAAGGCCTCGTGATTCCTCCGTCACCCTTCAAAGACAAACCCCAAAACGGAAGCTTCGTGGCTGGCGGTGATGCCGCGGTCAAGTCGCAGTGGTCACCCTCGAGGTCAACCGCCGCCTTCTCAGTCACGGGCTGCGGGGATAATGATGGCAACGAGGAagcatattttgattcaaaggtTTGGTTAGACTCAGATTGCGATGATGATTTCTATAGTGTCAAGGGTGAGTTTACCCCATCTCGTGGCAGTACTCCAGTGCACCaaatttttctctataaaacCCCTTCTTCTGAGCCTGGTTCTGTTCCTGAACCGTCTCcaacaacacaaaagaaaaagttgttggaGCTTTTTCGCGAAAGCGTGAGAGAAAACCAAACTGATGATGCTGAAGACACATCTGACAATGATAAGAAAGAAGTGAAACCAACAACTATACATGATCTTCTTCCTAAATCTGCACAAAGTACTCCTTATGTCTCAGGGGGCAACTCTGCATGCAATAGTGAAAGAACAATGAATGATGATCATGCTTCCATTAGAGACAAAACAGTTAAAGCTGTGCAGTGCTGCCTTCCAAGCTTGGCTTCATGTCGTAGCTTTAGTAAGAGGAAGACAAGTCCTGCAATAGCAGCTAATGGAAAAGCTTGA 729 0.4431 MGSCSSVHRNQQANMKHLTLSFESKPEGLVIPPSPFKDKPQNGSFVAGGDAAVKSQWSPSRSTAAFSVTGCGDNDGNEEAYFDSKVWLDSDCDDDFYSVKGEFTPSRGSTPVHQIFLYKTPSSEPGSVPEPSPTTQKKKLLELFRESVRENQTDDAEDTSDNDKKEVKPTTIHDLLPKSAQSTPYVSGGNSACNSERTMNDDHASIRDKTVKAVQCCLPSLASCRSFSKRKTSPAIAANGKA 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1954 242 MobiDBLite consensus disorder prediction 139 172 - -
Ssu4g1954 242 PANTHER - 1 240 - -
Ssu4g1954 242 MobiDBLite consensus disorder prediction 29 53 - -
Ssu4g1954 242 MobiDBLite consensus disorder prediction 119 200 - -
Ssu4g1954 242 MobiDBLite consensus disorder prediction 175 199 - -
Ssu4g1954 242 PANTHER OS01G0920100 PROTEIN 1 240 IPR038947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1954 Ssu-Chr4 37094145 37097488 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1954 - - gmx:100786649 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1954 4 37094145 37097488 Ssu4g1954 4 37094145 37097488 ECH