Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1945 ATGACCCTCCGTCTCGTGTCAGCTCCGCCgtcattctctctcttcacctGCCGCGCCACCGTCTCCACCACCCTCCCTCCGCCGACGCCGACACCTGCTTCTTCAATTCCACAGTCCCCGCCGCTAACGTGTTCGGGGTGCACTCACGAGTTTAACCTCCACCGTCCGGTAATATTGGACGACGCCACCGATTTCTTTCGGAAACACGGCGTCTCTGACTTCACATTTGACACTTGCAAACTGtgGGGTTGGAGGTGCCGTGCGAAATTGGCCGTGCGTGGCTCTTCGATGGACCCTCTCATTGGGCTCTATGAGGAGGGTACTCATAACGTAGTTGACATTCCACAATGCAAAGCTCATCACCCTAATATTAATGCTGCTGTGGAGCTGCTTAGACGGGGTATTACTGAATTAGGTGTTGAGCCATATATTGAAGATGAAGGTACTGGCGATTTGCGATATGTTCAGATGGCTGTGACTACATACAACACGTCTCTTCCTGCAGCTGAAAGATATAAGAATGGAAAGGTTCAGGTTACATTGGTTTGGAATTCAAGAAATGAAAATTCACCTGGTTCAGACAAACTGAATGCATTGGCAAATTTTCTATGGAAAAATGGGGGCCCACGGAGCAGGCTCCATTTAATTCACTCTGTGTGGGCCAACTTTCAGACTTCTACCAACAATATAATTTTTGGGAATAGATGGAGACATCTTCTTGGAGAAAGAGATTTTTGGGAGCATGTCGGTGGAATTGATGTGTCCTTGGCACCTTCTAGTTTTGGCCAGGCAAACACACGGGCTTTTGATGCCTTGCTTCGGAAGTTACAGAAATATGTTCCATATGAATCAGCTGTTGCTGATTTTTATGCAGGAGCTGGGGTCATTGGGTTGTCATTAGCTGCCACAAGAAAGTGCAGGTCCGTTAAATGCATTGAGATTAATAAAGAGTCGAAGGCATCTTTTGAGAAGACCATTGAACGTTTGCCTGCCACTGTTGACAGCAGTATTACTTGGCATCATGCAGATGCTTCAAAAGTTGCTCAAACTCAGCCCAGGAAGAGAAAAGACCATGGGTTTTACGTGCAAAAGAAGCTTCAGTCCAGATTGGAAGCAAACCTACCTCCAACTAACATCCCTCAATCAGTGCCACAAAcccttatttatataagttgTGGATGGGAAAGTTTTAAAGAGGACTGCAAGTCATTGTTGTCTAGTAAGGCGTGGTATTTGGAAAAAGCTCatggttttaatttctttcctgGTACCCAGAgCATTGAAGTTCTAGCAGTGTTCAAGAGGGGCCCTCAGAAAAAGAAAccaggaaagaaaaagaaaaaacacttgCAAGGAGCTGTGAGACATTAA 1371 0.4354 MTLRLVSAPPSFSLFTCRATVSTTLPPPTPTPASSIPQSPPLTCSGCTHEFNLHRPVILDDATDFFRKHGVSDFTFDTCKLWGWRCRAKLAVRGSSMDPLIGLYEEGTHNVVDIPQCKAHHPNINAAVELLRRGITELGVEPYIEDEGTGDLRYVQMAVTTYNTSLPAAERYKNGKVQVTLVWNSRNENSPGSDKLNALANFLWKNGGPRSRLHLIHSVWANFQTSTNNIIFGNRWRHLLGERDFWEHVGGIDVSLAPSSFGQANTRAFDALLRKLQKYVPYESAVADFYAGAGVIGLSLAATRKCRSVKCIEINKESKASFEKTIERLPATVDSSITWHHADASKVAQTQPRKRKDHGFYVQKKLQSRLEANLPPTNIPQSVPQTLIYISCGWESFKEDCKSLLSSKAWYLEKAHGFNFFPGTQSIEVLAVFKRGPQKKKPGKKKKKHLQGAVRH 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1945 456 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 64 435 IPR029063 -
Ssu4g1945 456 PANTHER BNAA06G32370D PROTEIN 351 436 - -
Ssu4g1945 456 PANTHER BNAA06G32370D PROTEIN 31 346 - -
Ssu4g1945 456 MobiDBLite consensus disorder prediction 437 456 - -
Ssu4g1945 456 Pfam Methyltransferase small domain 271 335 IPR007848 GO:0008168
Ssu4g1945 456 ProSiteProfiles SAM-dependent methyltransferase RNA m(5)U-type domain profile. 1 436 IPR010280 GO:0006396|GO:0008173
Ssu4g1945 456 Gene3D - 85 262 - -
Ssu4g1945 456 Gene3D Vaccinia Virus protein VP39 80 429 IPR029063 -
Ssu4g1945 456 MobiDBLite consensus disorder prediction 436 456 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1945 - - gmx:100816889 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1945 4 36969068 36980344 Ssu4g1945 4 36969068 36980344 ECH