Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1943 ATGGAGATAGTGTATCTCGCATTGAGTGTTGAAGATCCTGATTGGCGTAGAGGCCATAAACCATCATTTGCATTTGGAAGGATGAGAGCATTGAGATTGAGAAATTCTCTTTATCTTCCTCTCCTAGCGTTCTTGATCGTGCTGGTATGCTTCCTTCTATATCACTGCTCTATATCACTGGAAACGGGTTTCAGAAAGGTGGTTCTGTTCGAGCCTAGATCAACTTATTACTCACAAAATCAAGAATTGGATAACGTGCTGAGGAAGGCTATCATGCCAGACAAAACAGTTCTCCTAACAATGGTAGATGAATCATTGGCAAGTCCTGGATCTATCCTTGACATTTTACTACAAAGCTTCAAATCAGGTGAAGGGACCCAAAGATTGCTGAATCACTTGGTGATCATAACCATGGACCCACAAGCTTTTGAGTACTGCAGGTCCTTGCACCCCTATTGCATCCACCCCTCCACCTTTCCACATCATTTTGTCACCAAAAGACAATCCATTAAGACAACCCCAGTTCATAATTTATTCACTTGGACAAGAAACGACGTTTTGTTTGAAGTGGTTCGATTGGGTTACAACATACTTTTCACGGATGCAGATGTACTGTGGCTTAGAAGTccatttataaacttaaatccAGTTAATGAACTCACAATTTCATGTAATCACTTAAGTGATGGACAAAGAGGAGGTTACCTGCATGATGGGGGAATCTTCTTCTTGAAAGCAAATGCCATTTCATTTGAATTCTTCAAGCATTGGAAATTGACCAAGATTCTGTTTCCAAACGATCCCATAGAAGAGTCCTTGTGTACAACAATAAAACAATGGCATGATGTAGTTGACGGGTATGGTTTTCGTGTTCAGCTTGTAAATACAAGCTATTTTGGTGGGTTTTGTCAGCTAAATAAGGATATGTTAAGGGAGGCTTATACCATTCAAGCTAACTGTTGTGATGATCTCAAAAGCAAAGTTCATGACCTGAGGATTGTTCTTGATGATTGGATCCGCTTCAGAAAACGGGTATCAGGTGACAATGCTTTGGACAAAATGGCTTTGAGGTGGCCACAGAAGTGCTCCAGAAGAAATTATAGTTAG 1107 0.3993 MEIVYLALSVEDPDWRRGHKPSFAFGRMRALRLRNSLYLPLLAFLIVLVCFLLYHCSISLETGFRKVVLFEPRSTYYSQNQELDNVLRKAIMPDKTVLLTMVDESLASPGSILDILLQSFKSGEGTQRLLNHLVIITMDPQAFEYCRSLHPYCIHPSTFPHHFVTKRQSIKTTPVHNLFTWTRNDVLFEVVRLGYNILFTDADVLWLRSPFINLNPVNELTISCNHLSDGQRGGYLHDGGIFFLKANAISFEFFKHWKLTKILFPNDPIEESLCTTIKQWHDVVDGYGFRVQLVNTSYFGGFCQLNKDMLREAYTIQANCCDDLKSKVHDLRIVLDDWIRFRKRVSGDNALDKMALRWPQKCSRRNYS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1943 368 Pfam Nucleotide-diphospho-sugar transferase 129 331 IPR005069 -
Ssu4g1943 368 PANTHER GLYCOSYLTRANSFERASE 68 363 - -
Ssu4g1943 368 PANTHER EXPRESSED PROTEIN-RELATED 68 363 IPR044821 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1943 Ssu-Chr4 36906488 36909672 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1943 - - gmx:102666668 572.007