Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1938 ATGGCTTCCACGCCTTTCTCCACCCTCTGCCACTTCCACAAACCCACCCTCCGCGTCCTAGCTTCGGACAGGTTCAGCTTCGGGGGCGGCTCGGCGATCGCGTTCGGAAAGGTTCGGAAGAGCCGGAAAATAGGAACAATCCCCGTTTGCAGAGCAGGTTCTGCTGTCGTCTTCCGAGACCTCGACGCCGACGATTTTCGCCACCCTCTCGATAAACAGAATACGCTGATACTGAGAGCGATTCCGGGATTAAACGAACTGGGAAGAGCTCTTCTAGGAACTGTAGCTGAGCAGGTTATGCTCCTTGAAAACATTGGGACATCTGTCCTTGTTTCTAAAAATCAGCTTCCTGATCTTTACCACCTAATGCTCGAGGCTGCAGAAATATTAAATGTTGACGCCCCTGATCTATATGTTCGTCAAAGTCCTGTGCCAAATGCATATACATTAGCTATAAGCGGTAAACGACCGTTCGTTGTCATTCATACTAGCCTTGTGGAGCTCCTGACAAAAGCAGAGTTGCAGGCTGTTTTGGCTCATGAGCTGGGTCACCTAAAATGTGATCATGGTGTGTGGCTTACATATGCAAATATTCTAACCCTTGGAGCCTATACTGTACCTGGCATTGGCGGTATGATAGCTCGGACTTTGGAAGAGCAGTTATTCCGTTGGCTTCGAGCAGCTGAGTTGACTTGTGATCGAGCAGCTCTTCTTGTTGCTCAAGACCCTAAGGTCGTCATCTCTGTCCTCATGAAATTAGCTGGGGGATGTCCATCTATGGCTGATCAACTAAATGTGGATGCATTCCTGGAGCAAGCTCGCTCTTATGAAAAAGCTGCTTCCAGCCCAATTGGGTGGTATATAAGGAATGCACAAACAAGGCAACTGTCCCATCCTCTGCCTGTTCTACGTGCTAGTGAAATTGATGAATGGTCAAGAACTCCAGCTTATAAATCTCTTTTGAAACGTGGAATTCAGATAAAATCACTAGAACAAACAGTCTAG 1005 0.4756 MASTPFSTLCHFHKPTLRVLASDRFSFGGGSAIAFGKVRKSRKIGTIPVCRAGSAVVFRDLDADDFRHPLDKQNTLILRAIPGLNELGRALLGTVAEQVMLLENIGTSVLVSKNQLPDLYHLMLEAAEILNVDAPDLYVRQSPVPNAYTLAISGKRPFVVIHTSLVELLTKAELQAVLAHELGHLKCDHGVWLTYANILTLGAYTVPGIGGMIARTLEEQLFRWLRAAELTCDRAALLVAQDPKVVISVLMKLAGGCPSMADQLNVDAFLEQARSYEKAASSPIGWYIRNAQTRQLSHPLPVLRASEIDEWSRTPAYKSLLKRGIQIKSLEQTV 334
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1938 334 Gene3D Metalloproteases ("zincins"), catalytic domain 109 197 - -
Ssu4g1938 334 CDD M48_Ste24p_like 105 310 - -
Ssu4g1938 334 Pfam Peptidase family M48 118 311 IPR001915 GO:0004222|GO:0006508
Ssu4g1938 334 PANTHER OS01G0970700 PROTEIN 41 327 - -
Ssu4g1938 334 PANTHER CAAX PRENYL PROTEASE 1 41 327 - -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1938 - - gmx:100776801 615.535
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1938 4 36627859 36633189 Ssu4g1938 4 36627859 36633189 ECH