Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1936 atgaaaaagataaacgGAATAAGGCGGTTCCAATGTCCAAACACAATTCGTCGTTTAAGgaagccgaaggcatcagtgAACCGACCCCCCACACCAGATGTGGTCGAAAATGCCCCTGAAAGGGAACCCACGCTTCAAGAGCTCATCAACATCAAGTTGATCGAGACTGGAGAGAAGGAGCGCCTGATGGAGCTGTTGAGGGAAAGGCTTGTTGATTGTGGTTGGAAGGATGAAATGAAAGCTCTCTGCAGAGCCGTTGTGAAGAAGAAAGGGAGGAATAATGTTACTGTTGATGAACTTGTACATGTAATCACCCCGAAGGGCCGAGCCTCCGTTCCTGATTCCATAAAGGCTGAGTTGTTGCAGAGGATTCGCACATTTCTTGTGTCTGCTGCTCTTTAA 402 0.4378 MKKINGIRRFQCPNTIRRLRKPKASVNRPPTPDVVENAPEREPTLQELINIKLIETGEKERLMELLRERLVDCGWKDEMKALCRAVVKKKGRNNVTVDELVHVITPKGRASVPDSIKAELLQRIRTFLVSAAL 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1936 133 PANTHER TRANSCRIPTION AND MRNA EXPORT FACTOR ENY2 23 133 - -
Ssu4g1936 133 Hamap Transcription and mRNA export factor <gene_name> [SUS1]. 44 131 IPR018783 GO:0000124|GO:0003713|GO:0005643|GO:0006406|GO:0045893
Ssu4g1936 133 Gene3D - 34 132 IPR038212 -
Ssu4g1936 133 PANTHER ENHANCER OF YELLOW 2 TRANSCRIPTION FACTOR 23 133 IPR018783 GO:0000124|GO:0003713|GO:0005643|GO:0006406|GO:0045893
Ssu4g1936 133 Pfam Transcription factor e(y)2 48 128 IPR018783 GO:0000124|GO:0003713|GO:0005643|GO:0006406|GO:0045893
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1936 K11368 - gmx:100500039 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1936 4 36619325 36621636 Ssu4g1936 4 36619325 36621636 ECH