Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1935 ATGGACAACATGCACAGCTTCTGGCAATTGGGTGATGAACTCCGTGGACACTCAAAAGCATCGGAGGATCACAAGTGGTTAATGGTTGCTTCGAAATTGGCTGAGCAGACAAGATTAAAGGGGGAGCGTGTGAATAACCTTGATCTTTCGAAGGGCCCCATTGAAACAAGGTCAAGAGACAAATTTGGGTTCCAGGAAGAGAACAAATTTGACTCTCTTAACTTAAGCATGTTGAACCTGGACTCTAAATTTACTGAAAATGTGAGCAAAAGCTCGCTTCGAAATGGTGTTTACAGTATGAATGCAGTGTATCAGAAAAACAATGCAAACTTGGTGAGTAATGTGAACAGTAACAAGTATAGTGGTAATATTCAGCATAACAAAGAGTGCAACAACAACAGCAGtggcaacaacaataacaacaacaatgaaagcAACAACTTGAATGCAACTGACAAAAGGTTTAAGACGTTGCCTGCAGCAGAGACACTCCCACGTAATGAGGTGCTTGGAGGATACATCTTTGTCTGTAACAATGACACAATGCAGGAAGACTTAAAACGTCAGCTATTTGGTTTGCCTCCAAGGTATCGAGATTCTGTTAGGGCAATAACACCAGGGTTACCTTTATTTCTGTATAACTATACAACTCATCAGCTGCATGGTATTTTTGAGGCAGCAAGTTTTGGTGGCTCTAACATAGATCCAACTGCCTGGGAGGATAAAAAATGCAAAGGCGAATCAAGGTTTCCAGCTCAGGTAAGAATCCGTGTCAGGAAACTTTGCAAGGCATTGGAAGAAGATTCGTTCAGGCCAGTATTGCATCATTATGATGGTCCAAAGTTTCGTCTTGAGCTGTCAGTTCCGGAGACTCTGGATCTGTTGGACCTATGTGAACAAGCTGGTTCAGCTGCATAA 918 0.4096 MDNMHSFWQLGDELRGHSKASEDHKWLMVASKLAEQTRLKGERVNNLDLSKGPIETRSRDKFGFQEENKFDSLNLSMLNLDSKFTENVSKSSLRNGVYSMNAVYQKNNANLVSNVNSNKYSGNIQHNKECNNNSSGNNNNNNNESNNLNATDKRFKTLPAAETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRVRKLCKALEEDSFRPVLHHYDGPKFRLELSVPETLDLLDLCEQAGSAA 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1935 305 MobiDBLite consensus disorder prediction 114 149 - -
Ssu4g1935 305 Pfam Development and cell death domain 171 297 IPR013989 -
Ssu4g1935 305 PANTHER BNAC07G48970D PROTEIN 4 304 - -
Ssu4g1935 305 SMART dcd 168 300 IPR013989 -
Ssu4g1935 305 ProSiteProfiles DCD domain profile. 168 300 IPR013989 -
Ssu4g1935 305 PANTHER - 4 304 IPR044832 GO:0034976
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1935 Ssu-Chr4 36594672 36596941 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1935 - - gmx:100775724 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1935 4 36594672 36596941 Ssu4g1935 4 36594672 36596941 ECH