Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1934 ATGCAAACGGTTTGTGTTTGCGGAGATAAGCTACGGCGTTTCGACGCTGTCTCATTCTTCGGCTCTCGCGTGTCGTTTCCGAGTGCCCGTGTGTCGTTTGGCGCACCCAGAAGAAGCCGAGTATTATCCATGGTTGTTAAGCGCAGCCCCAAGCGTCTCAAATACACTACCGCTTCTCGCTTCACCAAGGAAGATGGTTTGGTGTACATTGAAGCGGACCCATCTGCCTCTGATTCTTGGAAATTGGAACCGATTGTCAATATGTTGAAACAAGGTGCTGTTGGAGTCATCCCTACGGATACCTTGTATGCAATAGTATGTGACCTCAGAAGCCACTCAGCCATTGAACGTCTTCGCAGAATCAAGAATATAGAAGCTTCAAAGCCTCTTAGCATCTTGTGCCACTCATTTCGGGACATAGACAAGTACACAGCTGGATTTCCACGTGGTGATGGTCAAGGCCATGCGAATTTATTCAAAGCTGTTAAGCATTACTTACCTGGTCCTTACACATTCATCCTAATTGCAAGCAAAGAATTACCTAAGCAATGCATAAGGTTTGGGACTTCTGCTGCCAAATATGCATCAAGAAAAAATGTGGGTGTCCGTATGCCTGATGATGCCATTTGTCAAGCAATACTAAAGGAGATGGATGCACCATTAATATGTACaagCATCAAGTTCCAGAAGGAAGATGACTGGATGATTGATCCAGTTATGATAGCTGATACATATGGACCAGAGGGTCttgattttgttgttgatgGTGGTGTAAGAGTGGCCGAACCATCCACGGTGGTTGACATGACCAAAATGCCTCCCAAAGTACTACGACAAGGAAAGGGTCCTATTTTACAATGGATGGAATTGGAAGATGATCAGAAAACTGATGTTGACAAGGATCTCATACCTGCTGGCATTTGA 924 0.4426 MQTVCVCGDKLRRFDAVSFFGSRVSFPSARVSFGAPRRSRVLSMVVKRSPKRLKYTTASRFTKEDGLVYIEADPSASDSWKLEPIVNMLKQGAVGVIPTDTLYAIVCDLRSHSAIERLRRIKNIEASKPLSILCHSFRDIDKYTAGFPRGDGQGHANLFKAVKHYLPGPYTFILIASKELPKQCIRFGTSAAKYASRKNVGVRMPDDAICQAILKEMDAPLICTSIKFQKEDDWMIDPVMIADTYGPEGLDFVVDGGVRVAEPSTVVDMTKMPPKVLRQGKGPILQWMELEDDQKTDVDKDLIPAGI 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1934 307 SUPERFAMILY YrdC/RibB 71 284 IPR017945 -
Ssu4g1934 307 Gene3D DHBP synthase 67 288 - -
Ssu4g1934 307 ProSiteProfiles YrdC-like domain profile. 79 282 IPR006070 GO:0003725
Ssu4g1934 307 Pfam Telomere recombination 88 280 IPR006070 GO:0003725
Ssu4g1934 307 PANTHER DHBP SYNTHASE RIBB-LIKE ALPHA/BETA DOMAIN-CONTAINING PROTEIN 20 298 - -
Ssu4g1934 307 TIGRFAM TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 78 282 IPR006070 GO:0003725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1934 - - gmx:100789682 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1934 4 36549907 36560474 Ssu4g1934 4 36549907 36560474 ECH