Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1933 ATGTTAAAGAACTTAACTCCAAATCAGAAGCATAGCTTTCTCCTCAATGTGAGTACAAACAAAGGAGAAAGAAATTCATCAGTTTATTCATGGTTCATCGATACAATACCTCCAACTGCAGCCATCACTAGTGAACAGATGCATACAAATGGGCAAAGGATAGCAATTGATGTCACGTTCAGTGAACCATGCACTGGACTTGGTGGATTTGATTGTCTAAACTCGTCAAACTGTGATATTATGGTAGCTGGTCCTGCCCAAGTGGATGCATCTTCTTTACAAATTATTAGACCAGGTGCCAAATACAGCCTTGAAGTGATTATCTCCTCAAAAATTACTTATGGGCGTGTAGTAATCACAATGGCGGAGGATACTTGCATTGACCAGGCTGGAAACCAGTTTATAAGGACCAATGACTCTACTTTGACTATTCATTTTGATAGAAGACCGGTGATGGTGGACTTTTGGACATCTGTTCCATCTTATGAGCTGAAAATTAACGGTATCCCAAGAACAGTAGTTGCAACATGCAAACCAGAGGACCTGATAATTTTCTTGGACTTTAGCATTCCTATAAGAAACTCAACTCAGCAAGTTCTAAATGCACTACATGTTAACTCTGGCGTCTTAACTCCTCTCCATGGTAGAAGCAATGGAACCCGCCGATTTAGTTTTAAGCTCACGAACATATCAAGAACAGAGATCATCACAGTTGAATTACAAGCTGCATCCATGCTTGGCAGGACAGGCACTCCTGTCTCTCCTGTTGCTCCTATCACTTTCCTTTATGatccCATAAAACCCAAGGTGGTACTAAGGACCAGCTTCCTCACTGAAACAAGGAATTTCAACCTCAACATAATTGCTGTGTTCACAAAGCCAGTATTTGGCTTTGGGGCCTCTATGGTAGAAGTCTCGGGAGGAAGATTGATAAGGTTAAAGGAACTATCAAGAGCATTATACTCATTGACTGTCCAAGCAGTGACAAAGGAGGTGTCAGTTACCATTCCTGCAGGGAAGGTAACTGATATTTCAGGAAATGAAAATTTGGCATCAAACCAGCTTGATATCAAGCATTATTCCACCCCTGCAATATCCATTGCACTGTACTCATTTATCAGTGCTGGAACAATAGCAACATCACTGGTAGCTGCTATGGTTTCACTCTCCTCAGCAAATTTAGAAGCATTAAGCATTCTTGCTTTGGGAGGTACAAGCAGTCCTGCTTCCAATCCATCGATTAATCTACatGGAGTGGTTGGACACCTACAAGTCTTTGCCCTCACAAGTTGGTTTTCAACTAATGAATTTATCAAATACTCTGAGACAACAAGAGGTCTACGGTGGCTCATACCTCATTACAAGCTTCCCTGGAAAAAATTTGACAGTTGGTCTTCAATCTTGGAAAGAGAGAAACTTGGAGGAAGAAGTAATGACCTATCTGCAGGAGAGAGAGATCAACAACAAACTGCTTTAATGAGCTTGTCTTATATTGATcacaatcacaaactatcatttcaAGCTGAAAATACCACCAAATATGGTTGGCTTCATAATCAGCACGATATAAGTAAGACAAGTACATTGTATGGTCTACCTCTCAATTCCATCGaatatttcacttatttcttgAGAGGAGAACCATTGTCTGCTAGCAATGTCATCAAAGGAATGGAGAGTTACAAAGGGTGGCAGGACATGGAGATGAATTTATTCTGGCTTGGTGTGGGAGGATGCTGTTTACTTTTAGTTCATGTTTTCATGATATTCTTCCTAAGACAGAGGACAGGGAGACCACCTCAAGGCAGTTTATCAGTTCCTAGGTTTGAGCTCTTTCTTCTGATTCTCATGCTACCTTGTCTTTCTCAGTCAtcaatatttgtaataaaaGGTGGTACAAGAGGGGGAATTATTACTGGGGTGCTGTTACTAGCAATCCCTGTAGCATTCATCTTATCAATattgctattttttattattgcaaTCTACTCTGGAAGTTTTGCCCAATACAAAGAATTCAAACAAGTAACTAATGAACAAAAATGGTACATGAAgttattgttctttttcactGGGAGGCCTACGACTGGAAAGTGGTTTAGCAGGGACGGGCTACCTTCCTCTCTCCTCTCCCGCTTTGGAACTCTCTTTGATGATAGGAAGGGTCCTCCGGTGCTCATTTTAGGTGATCAAAATGAACTGAATACCATAACCAAGTGGACTGAAAGTGGCCAAAGTGGGAGTGGAAGAATGAAGACAGTGAGTTCAGAGGACAGCAATGAGGAAATCAAAATCTCCACATTCAAGAGGGTACTGGGCTGCATGAGAGCATCCTATATCATCCTTGACTTATTAAGAAGAGTTGGTTTGGGAATAATATCCATAGCTTACCCTTCAGAAAACTCAAGTAAATGCCTTTTTGCATTGATAATCACATCAATACAGTTCATTTATCTGTTTACCACCAAACCATACATCAGCAGAGGCGTCCTGGTTGTGGAAAGTATTTCTCTCTTGTGTGAGGCAGCCGTGTTTGGTATCTTAGTCCTTCAGAGTGGTTTAAACTCAGTTGAAGCTAAAACTTGGGAATCGGTCATGTTGTTTCTTCTGTTGTTTACCTTCATTGCTCAGCTTACCAATCAATGGTACGCTATGGTAAATTCCCTATTGAAACTCTCACAGTCTCAGAATAATTCCCTAAGACATGGATTAAAGTTTGCTGCCAAGGGACTCATCCTGCCTTTCCTTCCAAGCAAGTATTGGTCTAGCGTCATATCCACATTCTCCCAACCAGAAACAGACCAGCTTTCAGTCAATCCTATATGTTCAGGAACAGAAtttgaaagaagaaatagaaatgGATATATGGATCCAATTAGCGCCATGACGGCTACTGTAGTCCCCGTGCAAAGTCCAAGCACACCCAGCCACAATGTTATTGAAAGAAGAGATCCTACAACCTCAGGTGCAAGAGCGCATATTGAAGTGGAAGGTAAATGGCTAAAGGGGCACAAAGCTGGGCTTAAAAAAGAGCTAAAGATGTTAAGGGAGCTTGCAAAAGCTAGCTTCTCTGCGGATACCAGGGTTGATGAAGCCAGTACCAGCTACAGTTTAGGTGAACAACATTCATCAGGTGAAATCTCTTTGAGTAATCCAAAGCGAAGATATTACTGA 3174 0.4008 MLKNLTPNQKHSFLLNVSTNKGERNSSVYSWFIDTIPPTAAITSEQMHTNGQRIAIDVTFSEPCTGLGGFDCLNSSNCDIMVAGPAQVDASSLQIIRPGAKYSLEVIISSKITYGRVVITMAEDTCIDQAGNQFIRTNDSTLTIHFDRRPVMVDFWTSVPSYELKINGIPRTVVATCKPEDLIIFLDFSIPIRNSTQQVLNALHVNSGVLTPLHGRSNGTRRFSFKLTNISRTEIITVELQAASMLGRTGTPVSPVAPITFLYDPIKPKVVLRTSFLTETRNFNLNIIAVFTKPVFGFGASMVEVSGGRLIRLKELSRALYSLTVQAVTKEVSVTIPAGKVTDISGNENLASNQLDIKHYSTPAISIALYSFISAGTIATSLVAAMVSLSSANLEALSILALGGTSSPASNPSINLHGVVGHLQVFALTSWFSTNEFIKYSETTRGLRWLIPHYKLPWKKFDSWSSILEREKLGGRSNDLSAGERDQQQTALMSLSYIDHNHKLSFQAENTTKYGWLHNQHDISKTSTLYGLPLNSIEYFTYFLRGEPLSASNVIKGMESYKGWQDMEMNLFWLGVGGCCLLLVHVFMIFFLRQRTGRPPQGSLSVPRFELFLLILMLPCLSQSSIFVIKGGTRGGIITGVLLLAIPVAFILSILLFFIIAIYSGSFAQYKEFKQVTNEQKWYMKLLFFFTGRPTTGKWFSRDGLPSSLLSRFGTLFDDRKGPPVLILGDQNELNTITKWTESGQSGSGRMKTVSSEDSNEEIKISTFKRVLGCMRASYIILDLLRRVGLGIISIAYPSENSSKCLFALIITSIQFIYLFTTKPYISRGVLVVESISLLCEAAVFGILVLQSGLNSVEAKTWESVMLFLLLFTFIAQLTNQWYAMVNSLLKLSQSQNNSLRHGLKFAAKGLILPFLPSKYWSSVISTFSQPETDQLSVNPICSGTEFERRNRNGYMDPISAMTATVVPVQSPSTPSHNVIERRDPTTSGARAHIEVEGKWLKGHKAGLKKELKMLRELAKASFSADTRVDEASTSYSLGEQHSSGEISLSNPKRRYY 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1933 1057 MobiDBLite consensus disorder prediction 968 989 - -
Ssu4g1933 1057 MobiDBLite consensus disorder prediction 968 983 - -
Ssu4g1933 1057 PANTHER - 2 1054 - -
Ssu4g1933 1057 MobiDBLite consensus disorder prediction 1033 1050 - -
Ssu4g1933 1057 MobiDBLite consensus disorder prediction 1033 1057 - -
Ssu4g1933 1057 PANTHER - 2 1054 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1933 Ssu-Chr4 36535942 36541402 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1933 - - vra:106753692 1756.11