Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1932 ATGCCTGCAATTCCCGAAGAGCCCCTCCTCGCCCCGAACCCCGACCGCTTCTGCATGTTCCCAATCCAGTACCCCCAAATCTGGGAAATGTACAAGAAAGCCGAAGCCTCGTTCTGGACCGCGGAGGAGGTCGACCTCTCCCAGGACCTCCGCCACTGGGACGCCCTCACCGACGGCGAGCGCCACTTCGTCACCCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTCCTCGAAAACCTCGGCGGCCGCTTCATGAAGGAGATCCAGGTCGCCGAGGCCCGCGCCTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACAGCCTCCTCCTCGAAACCTACATCAAAAACTCCGAAGAAAAAAACCGCCTCTTCCGCGCCATCGACACCATCCCCTGCGTCGCCAAGAAGGCCCAATGGGCCCTCCGCTGGATCGACTCCTCCGACTCCTTCGCGGAGCGCCTCGTGGCCTTCGCCTGCGTCGAGGGAATATTCTTCTCCGGATCCTTCTGCGCCATCTTCTGGCTCAAAAAGCGTGGCCTGATGCCCGGACTCACCTTCTCCAACGAACTCATCTCCCGCGACGAGGGGCTCCACTGCGATTTCGCGTGCTTGCTCTACTCTCTTCTCAGGGTTAGGCTCGGCGAGGAGCGCGTGAGGGAGATCGTGCGCGACGCCGTGGACATCGAGAGGGAGTTCGTGTGCGACGCGCTTCCGTGCGCGTTGGTGGGGATGAACGGGGGCTTGATGAGTCAGTACATCGAGTTTGTGGCGGACAGGTTGCTGGGCGCCCTCGGGTGCGGGAAGGTGTACAATGTGCCGAACCCCTTTGATTGGATGGAGCTGATTTCGCTGCAGGGGAAGACCAACTTCTTTGAGAAGCGCGTCGGGGAGTATCAGAAGGCCTCCGTTATGTCCAGTTTAAACGGGAACGGTGGGGCCCACGAGTTCAAGATGGACgaggatttttaa 990 0.601 MPAIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWDALTDGERHFVTHVLAFFAASDGIVLENLGGRFMKEIQVAEARAFYGFQIAIENIHSEMYSLLLETYIKNSEEKNRLFRAIDTIPCVAKKAQWALRWIDSSDSFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRVRLGEERVREIVRDAVDIEREFVCDALPCALVGMNGGLMSQYIEFVADRLLGALGCGKVYNVPNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGAHEFKMDEDF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1932 329 Gene3D Ribonucleotide Reductase, subunit A 3 307 IPR012348 GO:0016491
Ssu4g1932 329 ProSitePatterns Ribonucleotide reductase small subunit signature. 105 121 IPR030475 -
Ssu4g1932 329 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 5 329 IPR000358 GO:0009263
Ssu4g1932 329 CDD RNRR2 17 291 IPR033909 GO:0009263
Ssu4g1932 329 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 5 329 - -
Ssu4g1932 329 SUPERFAMILY Ferritin-like 5 307 IPR009078 -
Ssu4g1932 329 Pfam Ribonucleotide reductase, small chain 16 282 IPR000358 GO:0009263
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1932 Ssu-Chr4 36519995 36520984 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1932 K10808 - gmx:100790224 634.409