Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1921 atgGCAGATTGGGGACCAGTTTTTGTGTCTGTGGTGCTTTTCATTCTCCTCACTCCAGGGCTCCTGGTCCAGATACCTGGAAGAGGCAGGTTCATAGAGTTTGGTAACTTCCAGACCGGTGGATTATCAATACTGGTCCATGCTATCCTCTACTTTGCTCTAGTTTGCATCTTCATGTTAGCAGTTGGGATCCACTTGTACATGGGGTAA 210 0.4667 MADWGPVFVSVVLFILLTPGLLVQIPGRGRFIEFGNFQTGGLSILVHAILYFALVCIFMLAVGIHLYMG 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1921 69 PANTHER PROTEIN, PUTATIVE-RELATED 1 69 - -
Ssu4g1921 69 Pfam Protein of unknown function (DUF3339) 1 67 IPR021775 -
Ssu4g1921 69 PANTHER OS05G0103400 PROTEIN 1 69 IPR021775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1921 Ssu-Chr4 36174981 36175190 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1921 - - gmx:100527861 136.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1921 4 36174981 36175190 Ssu4g1921 4 36174981 36175190 ECH