Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1899 ATGCACTTCCAAGCGGCGTCGTGGGGGAGCTACGCGGCCCCGCGCAGCGCGGCGGTGGGGGACCCGCTGGAGCGCATTGAGAGGCTGGCGTCGGAGAACGCGGTGGTGATATTCAGCGTGAGCACGTGCTGCATGTGCCACGCCATCAAGAGGCTGTTCTGCGGCATGGGCGTGAACCCGACGGTGCACGAGTTGGACGAGGACCCCAGAGGGAAGGACCTCGAGAGGGCCTTGATGAGGCTCCTGGGTACCCCTTCTGTGGTCCCCGTCGTTTTCATTGGCGGCAAGCTTGTGGGCACCATGGACAGAGTCATGGCGTGCCACATCAATGGCACGCTTGTCCCTCTCCTCAAAGAAGCTGGGGCTCTCTGGCTCTGA 378 0.6376 MHFQAASWGSYAAPRSAAVGDPLERIERLASENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVHELDEDPRGKDLERALMRLLGTPSVVPVVFIGGKLVGTMDRVMACHINGTLVPLLKEAGALWL 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1899 125 PANTHER GLUTAREDOXIN 4 124 IPR011905 -
Ssu4g1899 125 Pfam Glutaredoxin 35 98 IPR002109 -
Ssu4g1899 125 SUPERFAMILY Thioredoxin-like 23 124 IPR036249 -
Ssu4g1899 125 Gene3D Glutaredoxin 20 124 - -
Ssu4g1899 125 PANTHER GLUTAREDOXIN-C5 4 124 - -
Ssu4g1899 125 TIGRFAM GlrX-like_plant: glutaredoxin-like family 26 125 IPR011905 -
Ssu4g1899 125 CDD GRX_GRXh_1_2_like 34 116 - -
Ssu4g1899 125 ProSiteProfiles Glutaredoxin domain profile. 23 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1899 Ssu-Chr4 35223069 35223446 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1899 1 125 Miscellaneous Gene Families AT3G02000 63.235 6.87e-51 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1899 K03676 - gmx:100818026 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1899 4 35223069 35223446 Ssu4g1899 4 35223069 35223446 ECH