Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1896 atgagataTGGCGGAGGTAGAAAGAGGCGATTGCTGTTGCAACCGTTTCTGGTTTTGTGTGCGACGGTGACCGGTTTGGGGCTGTTGATGCTGGCACTGAGGCCGTTGGATCCTCCGATCACCGTCGATTTCCCGAGAGATTTCGAGTTCGGAGATTCGAACAGCTCGAGTTTGGATGGCGGCGGCATCGTCGGAGAGAAACCGTGCGCGACGGTGGAAGAGATGGGGAAGGATTTCGAAACAGGCGTTGTTGGGAAGGAAACGCTGAGAGTGAGGAGAATTATCGAGGATCACTTCGTTCTGAACGgTGCTTCCAGAATCAGGGATTTGCCCCCGGAGCAGTTCTGTAGTCATGGATTTGTTCTGGGAAAGACTGCTGAGGCAGGTTTTGGGAATGAAATGTACAAGGTCTTAACTGCTGCAGCGCTGAGTATAATGTTAAACCGGTCCTTGATCATTGGCCAAACCAGGCATATTGGCAAATATCCTTTTGGGGATTACATTTCTTATTCCAACTTTACCTTTACcatgaatgaaataaaacatctGTGGAGACAAAATGGTTGTAAAAGCAAATATGGGAGGCAACTAGTTATGAGGACTGATGATTTTGAAAAGCCAGCTCAAACGAATGTTCTCTGTAGCAATTGGAAGGAATGGAAGCAACCTATCATATGgtttcaaGGAACTACAGATGCTGTGGCAGCtcaatttttcttgaaaaatatatacTCTCAGATGAGGATTGCTGCTTTTGATTTATTTGGTGATCCACAAGTTCTGGGATCTCGGCCAAATGTATTTGGAGAGCTCATGAGAATTCTCATATCCCCTTCAAAAGATGTCGAGGCAGCTGTCAATTGGGTTATTGGTGGTGAGGATAATCCTGACATCTCATTGCATATGCGGATGCTTATGAATAGgtccATAAGAGCTGTACAGGCTGCGTTGTATTGCATCAAAAAAGCCATACAGAGTCAGCGTCTAATGTCAAGACCAAAGGTGGTTGTGGTGTCTGATACACCTTCTCTTGTTAAAAGTATCGTGCCCAACATAAGTGAATTTGCAGAGgttctttattttgattatgagaAGTTCAAAGGAAATATCTTTGAAGGTTTGCCCAAGTCAGATTTTAGAGTGAAGGATTGGGGTCCAGCACCCAGGTGGGTTGCTTTTGTGGATTTTTTTCTTGCTTCTCGTGCTAAATATGCTGTTGTCTCTGGAGCTCATCGGCGTGTTGGAACTACGTATGCTCAATTAATCGCTGCACTGGCTGCAACACGCAATCTAGGAGACAACTCGTCTAgttcaagtttttcatttttgagcAGTTTCCAGAGTAATATGTTGACTGACGGTTTAAAGAATCAAATTGGTTGGGGCCATGTGTGGAACAGATATGCTGGACCGTTGAGTTGTCCTAACCAGACCAATCAATGTTCTTTCACACCACTTCTCCCTCCTGGGTGGTGGGACGGCCTATGGCAGTCTCCTATTCCTCGGGATATTAATCGTCTTGCAGCCTATGGCATCCAACTGTCAGGTCTTGGCACAGTTGATTACGATTCCCTTCAAAATTACTGTAGTTCAAGGAAAAATGTTGAGAGAGCCATCACATTCAATTTGTAG 1632 0.4277 MRYGGGRKRRLLLQPFLVLCATVTGLGLLMLALRPLDPPITVDFPRDFEFGDSNSSSLDGGGIVGEKPCATVEEMGKDFETGVVGKETLRVRRIIEDHFVLNGASRIRDLPPEQFCSHGFVLGKTAEAGFGNEMYKVLTAAALSIMLNRSLIIGQTRHIGKYPFGDYISYSNFTFTMNEIKHLWRQNGCKSKYGRQLVMRTDDFEKPAQTNVLCSNWKEWKQPIIWFQGTTDAVAAQFFLKNIYSQMRIAAFDLFGDPQVLGSRPNVFGELMRILISPSKDVEAAVNWVIGGEDNPDISLHMRMLMNRSIRAVQAALYCIKKAIQSQRLMSRPKVVVVSDTPSLVKSIVPNISEFAEVLYFDYEKFKGNIFEGLPKSDFRVKDWGPAPRWVAFVDFFLASRAKYAVVSGAHRRVGTTYAQLIAALAATRNLGDNSSSSSFSFLSSFQSNMLTDGLKNQIGWGHVWNRYAGPLSCPNQTNQCSFTPLLPPGWWDGLWQSPIPRDINRLAAYGIQLSGLGTVDYDSLQNYCSSRKNVERAITFNL 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1896 543 PANTHER EXPRESSED PROTEIN 7 541 - -
Ssu4g1896 543 PANTHER EXPRESSED PROTEIN 7 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1896 Ssu-Chr4 35103991 35109293 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1896 - - gmx:100807268 994.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1896 4 35103991 35109293 Ssu4g1896 4 35103991 35109293 ECH
Ssu4g1896 4 35103991 35109293 Ssu9g0331 9 16482315 16487388 PCT