Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1883 ATGAAGTCGCTTAGCAAGTTGAAGAAAATTGCACTTCCCAAGAGCGTTGGCAAGGACAAAAAGGACTTTCAGCCCACCGTTAAGTTCGACGAGCTCGCCCTCGCTGCCAAGGACATGCAAGACATGAGAGATTGCTATGATAGCCTGCTTGCTGCAGCTGCTGCTACACAAAACAGTGCTTACGAATTTGCTCAGTCGCTGCAGGAAATGGGTACTTGTCTACTGGAGAAAACTGCCTTAAATGATGATGAAGAAAGTGGTAATGTTTTGGGGATGCTTGCAAATGTGCAGCTTGAGCTTCAGAAGCTTGTTGATAGCTATCGTTCTCACATAGTACTGACAATAACCAATCCATCAGAGTCTCTTCTTAATGAACTAAGAACTGTTGAGGACATGAAGCGTCAATGTGATGAAAAAAGAGAAGTTTATGAATACATGATTGGccaacaaaaagagaaaggaaagtcAAAAAGTGGTAAAGGTGAAAGTATCACCTTACAGCAGTTGCAAGCAGCTCATGATGAATATGAAGAGGAAGCAACACTCTGTGCCTTTCGGTTAAAATCGCTGAAGCAAGGCCAGTCACGTAGTCTCCTAACACAAGCAGCGCGTCACCATGCCGCTCAGTTGAATTTCTTTCGGAAAGGACTTAAATCACTAGAGGCTGTTGAGCCACATGTTAGGATGGTTGCCGAACGGCAACATATTGATTACCAATTCAGTGACCTTGAGGATGATGGCGGTGAAGATGATAATATTGATGATGGGAATGATTTTGAGGTCATTGAAGGGGGTGAGTTGAGTTTTGACTACAGATTAAATAAGCAAGGGCCATATATTGTTTCAACATCACCAAACTCAGCAGAGGTGGAAGAATCAGGTCGTTCATATGTTCGAGCTTCAACCACAGAAACTGCAGAGacaaatttagacaagaaCCAAGGagattttaaagtttcaaaTAGAGTCAGCAGTTATTCAGCTCCAATAAGTGCAGAAAAGAGATTTGACCCAGCTGAAAAAGTAAGACAACTTCTATCATCATCTGCAGCAAAGTCTAACGCATATGTACTTCCTACACCTGTCAACAGCAAAGAAACCAAAACTAGCTCAGCCCCCCGTACAAGTGCAAGTGGATCTTTGCATAATTTGTGGCATTCTTCCCCTttggatgaaaaaaagaatgagaaagaTGTTGATAGTAGATTGTCAGAACCAACTATCCCTAGAGTGCACTCTGTTCTTACAGAAAGTAACAGTGATGCTACATCCACCCAGTTACCACGCCCTTCAGCAGAGGGACTCTCACTTCCACAAGTTGACCTTTTCAATGCTTCTGatactaagaaaataaaaagacaggCTTTTTCAGGTCCATTGACTAATAAACCCTTATCAGTAAAACCTGTTTCTGGGGGTTTTCCACGTTTACCAGTGCCACAGCCTTCGTCTCCGAAAGCATCGCCTAGTGCTTCACCTCCCCTTGTTTCTTCACCCAGGATAAGTGAGCTTCATGAGCTTCCTAGACCACCTGGTAATCAATCTAGCAAGACAGTGAAATCTTCTCGAGTGGGTCACTCTGCTccattagtattaaaaaatccAGAGGTTTCTGCAACTAATAAATTTCCTTCAGTTGTATCCAGTGCAGCATCTCCACTTCCAACTCCACCTATAATTGTATCTCGGAGTTTTTCTATACCCTCTAGTGGTCAGAGAGCTATGACAATAAATGTTTCTAATACTAAGTATTTGGATACTCCCCAAGTTTCAAAGGTCAATAAAGCTGCATCACCTCCATTAACACCCCTGTCCCAGAGAGCATCTAGTATATCTGACCTGGCTTCTCACTCTAGTGAAATCCAAGTGGATGCAGGTGGGAGCTAA 1887 0.4075 MKSLSKLKKIALPKSVGKDKKDFQPTVKFDELALAAKDMQDMRDCYDSLLAAAAATQNSAYEFAQSLQEMGTCLLEKTALNDDEESGNVLGMLANVQLELQKLVDSYRSHIVLTITNPSESLLNELRTVEDMKRQCDEKREVYEYMIGQQKEKGKSKSGKGESITLQQLQAAHDEYEEEATLCAFRLKSLKQGQSRSLLTQAARHHAAQLNFFRKGLKSLEAVEPHVRMVAERQHIDYQFSDLEDDGGEDDNIDDGNDFEVIEGGELSFDYRLNKQGPYIVSTSPNSAEVEESGRSYVRASTTETAETNLDKNQGDFKVSNRVSSYSAPISAEKRFDPAEKVRQLLSSSAAKSNAYVLPTPVNSKETKTSSAPRTSASGSLHNLWHSSPLDEKKNEKDVDSRLSEPTIPRVHSVLTESNSDATSTQLPRPSAEGLSLPQVDLFNASDTKKIKRQAFSGPLTNKPLSVKPVSGGFPRLPVPQPSSPKASPSASPPLVSSPRISELHELPRPPGNQSSKTVKSSRVGHSAPLVLKNPEVSATNKFPSVVSSAASPLPTPPIIVSRSFSIPSSGQRAMTINVSNTKYLDTPQVSKVNKAASPPLTPLSQRASSISDLASHSSEIQVDAGGS 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1883 628 MobiDBLite consensus disorder prediction 387 405 - -
Ssu4g1883 628 MobiDBLite consensus disorder prediction 475 489 - -
Ssu4g1883 628 CDD BAR 38 226 - -
Ssu4g1883 628 MobiDBLite consensus disorder prediction 454 533 - -
Ssu4g1883 628 MobiDBLite consensus disorder prediction 594 628 - -
Ssu4g1883 628 MobiDBLite consensus disorder prediction 509 523 - -
Ssu4g1883 628 MobiDBLite consensus disorder prediction 358 435 - -
Ssu4g1883 628 MobiDBLite consensus disorder prediction 411 432 - -
Ssu4g1883 628 SUPERFAMILY BAR/IMD domain-like 30 228 IPR027267 -
Ssu4g1883 628 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 612 IPR037488 -
Ssu4g1883 628 MobiDBLite consensus disorder prediction 358 385 - -
Ssu4g1883 628 Gene3D Arfaptin homology (AH) domain/BAR domain 30 245 IPR027267 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1883 Ssu-Chr4 34662289 34674900 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1883 - - gmx:100775799 1019.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1883 4 34662289 34674900 Ssu4g1883 4 34662289 34674900 ECH