Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1877 ATGGCTGATGCCAAAGACTCCTCCATGGTGGACTCCAAATCCAAATCTTCCCCAACCTCAGCCTCACAACAACATAGGGCTTTCTTGATGGCTCAGGACATCCTCAGAATCCTACCCACTCTGCTCTCCGCCGCATCGGTCGCAGTCATGGTCACCAACAACCAAACCGTTCTCATCTTCGGTATTCGCTTCGAAGCCCACTTTTATTACTCACCCGCCTTCAAGTTTTTTGTTGCCGCAAACGGTGTCGTCGCTGCCTTGTCTTTGCTGACACTGATAATGAACTTTCTGCTGAaacaacaagcatcacaaagaTGCCAATTCTTCCTATTTTTGCATGACATAGTGATGACGGTGTTGTTGATAGCTGGATGCGCGGCGGCAACTGCCATAGGGTACGTGGGGCAGTTTGGTGAGGAGCATGTGGGTTGGCAGCCAATTTGTGATCATGTGCGAAAGTTCTGCAGAACAAACTTAGTTTCCCTTTTGCTTTCCTATTTTGCCTTTGTTGCCTATTTCGGACTCACTGTTATATCAGCCTACAGATGCGTCTCTTCTGCTTCCAAGAACTAA 573 0.466 MADAKDSSMVDSKSKSSPTSASQQHRAFLMAQDILRILPTLLSAASVAVMVTNNQTVLIFGIRFEAHFYYSPAFKFFVAANGVVAALSLLTLIMNFLLKQQASQRCQFFLFLHDIVMTVLLIAGCAAATAIGYVGQFGEEHVGWQPICDHVRKFCRTNLVSLLLSYFAFVAYFGLTVISAYRCVSSASKN 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1877 190 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 15 183 - -
Ssu4g1877 190 MobiDBLite consensus disorder prediction 1 22 - -
Ssu4g1877 190 Pfam Casparian strip membrane protein domain 30 171 IPR006702 -
Ssu4g1877 190 PANTHER CASP-LIKE PROTEIN 1F1 15 183 - -
Ssu4g1877 190 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 34 182 IPR006459 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1877 - - gmx:102659722 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1877 4 34439079 34440902 Ssu4g1877 4 34439079 34440902 ECH