Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1874 ATGGCGGATCCAATCGCGAAGGCTCTGATCGCGTTTGCGCTCTTAGCTTCCCTGTTGCTGTGCTCGCACGCTTCCTCTGACGTACCCTTCATCGTCGCTCACAAGAAGGCCACCCTCAACAGACTCAAGTCTGGCGCTGAAAGGGTCTCCGTCACCATCGACATCTACAACCAAGGAACCTCgacgGCATATGATGTAAGTTTAGCGGATGATAGCTGGCCAAATGATGCATTTGATGTAATCAGCGGTAGCACTTCAAAGTCATGGGAAAGGCTTGATGCTGGTGGCATCCTTTCTCACACATTTGAGCTGGAGGCAAAAGCAAAGGGGGTTTTTGCTGGTGAACCAGCTGTCATAAAGTTCCGTGTTCCCACAAAGGCTGCTTTACAGGAGGCATATTCAACTCCCATATTGCCTTTGGATGTTCTTGCTGATAGACCACCTGAGAAGAAGTTTGAATGGAGGTTGCTGGCTAAGTACGGATCTCTAATCTCAGTGATCTCCATCATGGTCCTGTTCGTATACTTGGTAGCTACACCATCAAAATCCAGTGCAAAAGGAAGCAAGAAGAAGCGTTAA 579 0.4801 MADPIAKALIAFALLASLLLCSHASSDVPFIVAHKKATLNRLKSGAERVSVTIDIYNQGTSTAYDVSLADDSWPNDAFDVISGSTSKSWERLDAGGILSHTFELEAKAKGVFAGEPAVIKFRVPTKAALQEAYSTPILPLDVLADRPPEKKFEWRLLAKYGSLISVISIMVLFVYLVATPSKSSAKGSKKKR 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1874 192 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT 8 186 - -
Ssu4g1874 192 PANTHER BNAA02G28300D PROTEIN 8 186 - -
Ssu4g1874 192 Pfam Translocon-associated protein beta (TRAPB) 15 188 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1874 K13250 - gmx:100500066 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1874 4 34322880 34325222 Ssu4g1874 4 34322880 34325222 ECH