Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1873 ATGGTCAATCAGAATACTAGAAAGGTAAGCGCCTCCAGGCGGGCGAATATGGAAGCTCCTCCACACATGTTAGAGCTTGGGGGACTTATGTACCACCCAAATTTGGCAGCCCATGGTAGGACCAAACAAGCACTTGGGGGACCAACCGAGGTGGCACGCCGAGCACAAATCGACCAAACacaaataagaaaacaaagcTCCCCATACGCAATCCTAGAAACTAAGGCCGGAATCTTGGCATTTATGGCAGGTAGGCAATCTCAGCAGAGCCAAGAACCTCATTTCTCATCATTTCTACTTCTACCTCTTTCTCTTGGAGTGACAAACAAGATGaacaccaacaacaacaacaacaacacccCAAAAAACCAATCATTTCCAGAAGCACAAGGTGCGGCATCTTCATCATCTTCCCCACCCGAGAATTGGGGAACTCACATCATGGGCACCCCCGCTGTTCCTAGCAGCCACCCAGATAACAAAAAAGCAGCTTTACAAAGCGGTGGTAGCGGACAACCTCAACCAGTTCAATACTACCAACATCCCTACGTGCAACACAGCCCCGTTGAGAAACCAAGCAACAGTCCCATGGAGTCAATCCTCAACATGTTCAATTCCTGGAGCAAAAAGGCTGAAGCCACCGCTCACAACGTCTGGCACAACCTTAAAACAGGTCCATCGGTGTCTTCAGCTGCGTTGGGTAAGATGAATCTGACGGTGAAAGCGATATCAGAGGGTGGTTTTGAGTCCCTTTACAAGCAGACATTCACAACCTATCCAAACGAGAAGCTCAAGAAGAGCTTTGCTTCTTACCTTTCAACATCAACTGGTCCCGTTGCAGGAACCCTTTACCTGTCTAATATTCATGTAGCGTTTTGCAGCGATCGCCCATTGTGTTTCACTGCACCCTCTGGCCAGGAAACTTGGACCTACTACAAGGTATTTATTATAGTGAAAACACCTTAA 966 0.4576 MVNQNTRKVSASRRANMEAPPHMLELGGLMYHPNLAAHGRTKQALGGPTEVARRAQIDQTQIRKQSSPYAILETKAGILAFMAGRQSQQSQEPHFSSFLLLPLSLGVTNKMNTNNNNNNTPKNQSFPEAQGAASSSSSPPENWGTHIMGTPAVPSSHPDNKKAALQSGGSGQPQPVQYYQHPYVQHSPVEKPSNSPMESILNMFNSWSKKAEATAHNVWHNLKTGPSVSSAALGKMNLTVKAISEGGFESLYKQTFTTYPNEKLKKSFASYLSTSTGPVAGTLYLSNIHVAFCSDRPLCFTAPSGQETWTYYKVFIIVKTP 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1873 321 MobiDBLite consensus disorder prediction 160 177 - -
Ssu4g1873 321 SMART gram2001c 250 321 IPR004182 -
Ssu4g1873 321 Gene3D - 248 317 IPR011993 -
Ssu4g1873 321 MobiDBLite consensus disorder prediction 110 177 - -
Ssu4g1873 321 PANTHER GEM-LIKE PROTEIN 2 114 316 IPR037848 -
Ssu4g1873 321 Pfam GRAM domain 253 297 IPR004182 -
Ssu4g1873 321 PANTHER GEM-LIKE PROTEIN 5 114 316 - -
Ssu4g1873 321 MobiDBLite consensus disorder prediction 110 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1873 Ssu-Chr4 34310969 34314479 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1873 - - gmx:100811963 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1873 4 34310969 34314479 Ssu4g1873 4 34310969 34314479 ECH