Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1856 ATGGCGTGCACCATCGACTTTCGCTGCCTCGACGAGGGTTTCGGCGGCAAAACCTACAAGCGCAAGAGGGAGCAGCAAGCCCAGGTCGACGCCGGTGACGCCTCTCTCATGGACACCGACCAGGCCGTCGCGCCGCCGGCGAAGCGGTCGGCGCTGCCGTCGTTGGAGAACCCGGATAGGCCGGCGCTGGGGCGGCCGAGCTACGACGGCGTGATCGCCGGGAAGGTGTCCGGGCGGAAGTGGAAGCAGGCGCGGCAGCGGAGGGCGTCGGCGGCGCAGGTGAGCCGGAAGGGCACGACGTTCgagcagagggagagggagaaggTGATAAAGAAGGCGTACAAAGAGAGGATGACGGAGCTGAAGGAGGAGATTCGGTTGAACAAGGTCGAGAAGCGGaagaagagagaggagagggagaagaagaagcaggAGAATATTATCAGATCTGGAACTAAGTTTCAGAAGATTACCAACCCTAACACTTTGAAGAAGATTGCCAAGTCCAAGCAGAGGAAGCAGCTTAGGGTTGTTCCCGATGAATTGCTTAGGAAATAg 558 0.5358 MACTIDFRCLDEGFGGKTYKRKREQQAQVDAGDASLMDTDQAVAPPAKRSALPSLENPDRPALGRPSYDGVIAGKVSGRKWKQARQRRASAAQVSRKGTTFEQREREKVIKKAYKERMTELKEEIRLNKVEKRKKREEREKKKQENIIRSGTKFQKITNPNTLKKIAKSKQRKQLRVVPDELLRK 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1856 185 Pfam Cgr1 family 74 174 IPR005579 -
Ssu4g1856 185 MobiDBLite consensus disorder prediction 20 100 - -
Ssu4g1856 185 MobiDBLite consensus disorder prediction 131 149 - -
Ssu4g1856 185 MobiDBLite consensus disorder prediction 150 165 - -
Ssu4g1856 185 PANTHER UNCHARACTERIZED 1 183 IPR026570 -
Ssu4g1856 185 MobiDBLite consensus disorder prediction 131 185 - -
Ssu4g1856 185 Coils Coil 104 147 - -
Ssu4g1856 185 PANTHER BNAA04G18300D PROTEIN 1 183 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1856 - - gmx:100800534 289.656