Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1854 ATGCAGACAGCTTTAACCTTTGCTGCCCCCAACGTTGTGCCTTTGGCACCCACGAAGAGTGTCTCCCAGCTTACCAGCTTCCCTACCAAATTGAAAGCCCCACGCGCCTCACCTAGCCACTCTCCAATCAAGGTTGCCACCGTGGACAACGACACTTCCACAGTGGATTACAACTCTGCGTTCTCAGTGTTTCCAGCAGAAGCATGCGAAACTATAGGAGGGGAAGCCTGCATGGCAGACATGTACCCTGAAGCGAGGCTGCAGCCAGAGGCTAAGACACCACGAGTTGCCACAGAGAATGTCGAGAGAGAGTATCTTGAATACAATGATCCTAAAACGGTATTTCGAGCAGAGGCTTGTGATGATCTTGGAGGAACTTTCTGTGAGCACGAGTATCAGAAGAATGTCTACTAG 414 0.5072 MQTALTFAAPNVVPLAPTKSVSQLTSFPTKLKAPRASPSHSPIKVATVDNDTSTVDYNSAFSVFPAEACETIGGEACMADMYPEARLQPEAKTPRVATENVEREYLEYNDPKTVFRAEACDDLGGTFCEHEYQKNVY 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1854 137 PANTHER LIGHT-REGULATED PROTEIN 1 137 - -
Ssu4g1854 137 PANTHER LIGHT-REGULATED PROTEIN 1, CHLOROPLASTIC 1 137 IPR009856 GO:0009507
Ssu4g1854 137 Pfam Light regulated protein Lir1 1 129 IPR009856 GO:0009507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1854 - - gmx:100305960 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1854 4 33905829 33907081 Ssu4g1854 4 33905829 33907081 ECH