Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1844 ATGGAAGACAGTTTCAGAGTGCGTGTAGAGAGAGCCTTTGGTTCTCTTCCAATaccctcttcctcttctctcaACTCTCTTTGGTCTCTCACCGAAGACGAAATCGACAAAGCACCCTCCAATCGCACCCGCCAACCCAAACCCGAACCGCAACCCTACTCATCTTCCAGTTTCCCGGTTCAGCTGGAGAAGCACCTCGACGATctcgacgacgacgacgacgacgacgaggAAGCGCCACGTGGCCCCTCTAAACCCCCCGATTACGATGATGAACAGTGGCAGATTAGGTCTGGTATTGGCCGAGATTGCACCCTCGATTACGAGGAAGAGGAGGATCAATATGACAAGCAGGCTATTGGCAAAGAGAACTTGGCTGATCGCGTGTATATGAGGGATATAAACGATGATGGAGTCGAGATTAGTTCTTGCAGTGTTTTCCCCACTTCGTTCAGAGATTTTGTGAGAGACCCGCGTGCAAATCATTTGGCTGCGAGGATTAGGCTGAAGCAGGATGATGAAGCAGCTAGAAGAATTGATGCTCTACATGTCTCTGAGAAGTCTGCACCAGacattggtggtggtggtggtgatgctgTTAACCCCAAGTCAATTTTGAAGAGTAAAGATAATTATGCTTCGGAGCCCAGGCCGCAGAAACGTGTTCGGTTTGATTCTGAATGTGATGATAGAggtaatgatgatgatggtgggcATGAAGGAACCAGGGATGTTCGCATGAAGACCTCTTCAATGGAAGAGGTTGCAGGTTCGGATCAGTTGGCAAAAGCACAAGAATTTGATTCAGCAGTTCCAGATTATATTCGTAATCCTTCACGGTACACGCGTTACACTTTTGATGATTCTTCAAGTGACATGGATGACAAATCAAATAAGGAAGCATACATGAGTTTCCTTGCACAGTTAAAGGGGTCAAACGCTTCCAAGGGAACTGCTTCTCAAGCAGATGAAGCTTTGGATGATCTTCCATCAGTAACCTTTATATCGAAGAAGAAATCTGGTGATGCCCATATGCGCGACAGTGAGATGGTGTCAAAGCCAAAGCTTGATGTTGGCATGGAGGCCATGAATAGAAGAGCCTTCCCTGTTGGCATAGCTGCTGGTGACTCTGAAAACAGTGACGTTTGTGCGATGGAAGAAGATGAACCAGAAGTTGAGGGTGATAAAAAGAGCTTGCAGAAGTTGAACCGCAAATACAGGAAGAAAACTCAGGAGGAGTTGGAGGAGCCTGTTGCGTAA 1260 0.4294 MEDSFRVRVERAFGSLPIPSSSSLNSLWSLTEDEIDKAPSNRTRQPKPEPQPYSSSSFPVQLEKHLDDLDDDDDDDEEAPRGPSKPPDYDDEQWQIRSGIGRDCTLDYEEEEDQYDKQAIGKENLADRVYMRDINDDGVEISSCSVFPTSFRDFVRDPRANHLAARIRLKQDDEAARRIDALHVSEKSAPDIGGGGGDAVNPKSILKSKDNYASEPRPQKRVRFDSECDDRGNDDDGGHEGTRDVRMKTSSMEEVAGSDQLAKAQEFDSAVPDYIRNPSRYTRYTFDDSSSDMDDKSNKEAYMSFLAQLKGSNASKGTASQADEALDDLPSVTFISKKKSGDAHMRDSEMVSKPKLDVGMEAMNRRAFPVGIAAGDSENSDVCAMEEDEPEVEGDKKSLQKLNRKYRKKTQEELEEPVA 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1844 419 Pfam Tumour suppressing sub-chromosomal transferable candidate 4 261 313 IPR029338 -
Ssu4g1844 419 MobiDBLite consensus disorder prediction 79 97 - -
Ssu4g1844 419 MobiDBLite consensus disorder prediction 213 250 - -
Ssu4g1844 419 MobiDBLite consensus disorder prediction 376 419 - -
Ssu4g1844 419 MobiDBLite consensus disorder prediction 35 119 - -
Ssu4g1844 419 MobiDBLite consensus disorder prediction 47 61 - -
Ssu4g1844 419 PANTHER TUMOR SUPPRESSING SUBTRANSFERABLE CANDIDATE 4 TSSC4 1 411 IPR029338 -
Ssu4g1844 419 MobiDBLite consensus disorder prediction 180 270 - -
Ssu4g1844 419 MobiDBLite consensus disorder prediction 390 419 - -
Ssu4g1844 419 Coils Coil 392 416 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1844 - - gmx:100819106 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1844 4 33728481 33730258 Ssu4g1844 4 33728481 33730258 ECH