Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1836 ATGCTGGAATGCGTCTCGTTCAAGTCGTCCACTTCCACCACCAACACTACTTCTCTTCCTCCCCCTGCCCCTTCCCATTCCGAAGGGAACTCGACGGAAGCAGAAGAAGGCACTCCCGCCACAAGCCCGAACGTCTCGCGCGAGTTCCACCGGGCCGTGCAGGCCCACTCCTACAACGAGATCCGGTCCGTGGTCCAGGCCCCTCCGCAGGCCCACCACCTCGACGACGAGGACTCGCACCACCGCCACGTTCTCTCCCAGGTCCTCCAACCCGACTCACACAGCGTCCGTGAAGCACTGGCCAAAGCCGAACCCAGAAGCACCCTCACGCGCCTCGTCTCCGCCTACTTCGACCACAGCGAAACCGCCTCCGACTTCTGCCTCCGCCTCAGCCGCGGCATCGACCGCGCGCGCCGCCTCTACACGCCGCTCTCCGACCTCCTCGCCGTCCTCCCCGCCGACGCGCCGCCCCTCTCGCAGCCGCAATGCGACGGCGCCTACGACCTCTTCCTCCAATTCGACCAGGAGGAAAACCCGTTCGCGCTCTCGCGCCTCCACCGGCTCCGCGACAGCTTCTCCGGCCTCAAGCGCGACATCCAGCGCGACCTCCGCAGGTGCCACTCGCGGATCCGCATGGTCCGCCACGCTGCGGCAGCTTCGGCCGTCTGTTTGATTGCCGCGGCCGCCGGTACCGTCGTTGTCGCCGCCGTCGTCGCCGCGCACGCCGCGGTAGGGTTTAGTGCCCTTGCTGCGGCGCCGTTCTGCGTCCCGCGGCCGAGGAGGAGGGAGCTTGCGAGGTTGAAGCAGCTCGAGGCTGCGGAGAATGGGACTCTCGTGGTGAATGATATTAACACTATTGATAGTCTCGTTGACCGGCTACAAACCGCGGTGGAAGGCGATAAGGCTTACGTTCGGTTTGCGTTGGAGAGGGGAAGGGAGAGGCACCCCATTCAGGAGGTGCTCAAGCAGCTTAGAAAGAACCAACCTGTTTTGGAGCAGTTGCTCGGGGATCTTGAGCAGCATATATACTTCTGCTTTTACAGTGTTAACAAGGCCAGATATGCTCTCCTCAAAGAGATATGCCTTCACCAAACTCTCTAG 1101 0.6285 MLECVSFKSSTSTTNTTSLPPPAPSHSEGNSTEAEEGTPATSPNVSREFHRAVQAHSYNEIRSVVQAPPQAHHLDDEDSHHRHVLSQVLQPDSHSVREALAKAEPRSTLTRLVSAYFDHSETASDFCLRLSRGIDRARRLYTPLSDLLAVLPADAPPLSQPQCDGAYDLFLQFDQEENPFALSRLHRLRDSFSGLKRDIQRDLRRCHSRIRMVRHAAAASAVCLIAAAAGTVVVAAVVAAHAAVGFSALAAAPFCVPRPRRRELARLKQLEAAENGTLVVNDINTIDSLVDRLQTAVEGDKAYVRFALERGRERHPIQEVLKQLRKNQPVLEQLLGDLEQHIYFCFYSVNKARYALLKEICLHQTL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1836 366 PANTHER OS04G0405700 PROTEIN 25 364 - -
Ssu4g1836 366 PANTHER UPF0496 PROTEIN 3-RELATED 25 364 IPR007749 -
Ssu4g1836 366 Pfam Protein of unknown function (DUF677) 193 360 IPR007749 -
Ssu4g1836 366 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1836 Ssu-Chr4 33460396 33461585 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1836 - - gmx:102665502 562.377