Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1833 ATGGCTGTTTCGTATGTTCACATGGTTCAATCTGCCAGGGGTTTCCACAAGGGCAACCTCTCCTCTCCCAGAAGCAGTTACAAGGGGAGGAGGACCCACTGCTTAGTTTTTGCTTCTATGCACACATCAGACCCCAAGGTAGACTCATTACTGGACAGTATAAAATGGGATAACAAGGGTTTGGCTGTGGCAATAGCTCAGAATGTTGACACAGGGGCCATATTAATGCAAGGTTTTGCGAACAGAGAAGCAGTGGTTACAACCATGTCTTCTCGAAAGGCCACATTCTATAGCCGATCACGATCTACATTGTGGACCAAAGGAGAGAcctctaataattttatcaatgttCATGATGTCTTTCTTGATTGTGATCGTGATTCTGTAATATACCTGGGGAAACCTGATGGGCCTACCTGCCACACGGGGGCTGAAACATGCTATTATACCTCAGTCTTTGACTTGTTAAAACAGCAAGAGCCTGAAGGAAATAAATTGGCATTAACCTCTTTGTATGCTTTAGAGTCAACAATCTCTCAACGCAAAGCAGAGTTAGCAGGAGAAAATGAAAAGCCTTCATGGACAAAGCGATTATTGCTTAATGATAAGTTGCTATGCTCTAAAATCAGAGAAGAGGCAAATGAGTTGTGTCAAACACTAGAGAATAATGAGGACAAGTCACGTACTGCCTCAGAGATGGCTGATGTACTCTATCATGCCATGGTTCTGTTGGCACAGAAAGATGTCAAAATAGAAGATGTTTTGCAGGTTCTTCGGCTGAGATTTTCCCAATCTGGTATTGAGGAGAAGAGAAGTCGTGTATCCCCGAAATCGGTGGATGGTTGA 846 0.4267 MAVSYVHMVQSARGFHKGNLSSPRSSYKGRRTHCLVFASMHTSDPKVDSLLDSIKWDNKGLAVAIAQNVDTGAILMQGFANREAVVTTMSSRKATFYSRSRSTLWTKGETSNNFINVHDVFLDCDRDSVIYLGKPDGPTCHTGAETCYYTSVFDLLKQQEPEGNKLALTSLYALESTISQRKAELAGENEKPSWTKRLLLNDKLLCSKIREEANELCQTLENNEDKSRTASEMADVLYHAMVLLAQKDVKIEDVLQVLRLRFSQSGIEEKRSRVSPKSVDG 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1833 281 Pfam Phosphoribosyl-ATP pyrophosphohydrolase 189 258 IPR021130 -
Ssu4g1833 281 PANTHER BNAC05G24080D PROTEIN 1 274 - -
Ssu4g1833 281 PANTHER HISTIDINE BIOSYNTHESIS BIFUNCTIONAL PROTEIN 1 274 - -
Ssu4g1833 281 SUPERFAMILY HisI-like 51 153 IPR038019 -
Ssu4g1833 281 SUPERFAMILY all-alpha NTP pyrophosphatases 171 263 - -
Ssu4g1833 281 Coils Coil 206 230 - -
Ssu4g1833 281 Gene3D - 168 263 - -
Ssu4g1833 281 Hamap Histidine biosynthesis bifunctional protein HisIE [hisI]. 52 263 IPR023019 GO:0000105|GO:0004635|GO:0004636
Ssu4g1833 281 Pfam Phosphoribosyl-AMP cyclohydrolase 76 149 IPR002496 GO:0000105|GO:0004635
Ssu4g1833 281 CDD NTP-PPase_HisIE_like 171 258 IPR008179 GO:0000105|GO:0004636
Ssu4g1833 281 Gene3D - 43 140 IPR038019 -
Ssu4g1833 281 TIGRFAM histidine_hisI: phosphoribosyl-ATP diphosphatase 171 258 IPR008179 GO:0000105|GO:0004636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1833 K11755 - gmx:100807276 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1833 4 33405155 33407165 Ssu4g1833 4 33405155 33407165 ECH