Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1830 ATGAGAATCATGGACAGTTCTGAGGATCCAACAATGATGGCTGTATCTGATGCTGAGCTTTCACAGGGAGAAGATACAGCACTAGAGGAAGCATCGCAATTATCTTGCCTTTCAGTATCAACACCTTCAAGGATCAGTGGTCGACAGGATGTGTTTCAAAGGCACATTTTTGCTGGTGCTGATATATCATTTGGTTTTTGTTCAATGGGTTGGTTAGGTCGCCTTCGTTTCTTCAGTCCACAACAAAACTTGAAATTTCCCTCACCTCAGCAGATTTTCTGCTGCGTTTTCCCATCCTTTAATCCTATAGATGTTCCTAAACAAGCAAGTATTACTGATGTTCCTTATGGTGAAAATAACCGGTTTGATGGTATTAGTCTCAGTCAACAAACCCAACTTTCTACTGAGTTTTCTAATGATGTTTTTAGTCCCAAAAAATCACCAAGCAGTGAAAGAAAACTAATGTCAAGGGCACAAAGGCAAAGACAAGTGGCTTTCGTTGCACAACAGCAGCTCCTCATTGATCTAATAACCTTGGAGCCTCACGAGTATGAGTCAATGAAAGAGGCAGCAGATGACACTTTTGCTCTATTAGATAATTTAGGGGCAAATGATAGACAATTCTGTGAGCATATCTGGGATTTCATAAGTCTTACATCATCCGTTGCACAAATGAACACAACCATTGAAGATTCCCTTTCTCCTGAGGAACACAGTAAATGTCTTGAGGAGGAGAAAGCAAAATTTGCTCACATTCACAGCCTATATGTTAAGACCGAAGCTCTGTTCCAAGCTTCTGATCAATGTAGACAATCACTTTGTAAAGAGATCTCTCACTTCGAGGCCGTACTTCTTGAGAAACAAAGCCAATTAAAGTCCTATGAATTGGAAACTTCAAACATTGAAATAGAACTCGGTGATTTGAGAAGAAATATGTTGGAATCTGATACAGCCTTAAAGGCTAGAGCTGAGCAAGCAAAGGTAGCAAGGAAACTCAGGGAAGAGagaaaagcaaaacaaattgCAGCCAAAACAGCCCTCGAGAAGGCCATACttgaattagaatattaa 1071 0.394 MRIMDSSEDPTMMAVSDAELSQGEDTALEEASQLSCLSVSTPSRISGRQDVFQRHIFAGADISFGFCSMGWLGRLRFFSPQQNLKFPSPQQIFCCVFPSFNPIDVPKQASITDVPYGENNRFDGISLSQQTQLSTEFSNDVFSPKKSPSSERKLMSRAQRQRQVAFVAQQQLLIDLITLEPHEYESMKEAADDTFALLDNLGANDRQFCEHIWDFISLTSSVAQMNTTIEDSLSPEEHSKCLEEEKAKFAHIHSLYVKTEALFQASDQCRQSLCKEISHFEAVLLEKQSQLKSYELETSNIEIELGDLRRNMLESDTALKARAEQAKVARKLREERKAKQIAAKTALEKAILELEY 356
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1830 356 Coils Coil 329 349 - -
Ssu4g1830 356 Coils Coil 291 311 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu4g1830 Ssu-Chr4 33342990 33344644 Proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1830 - - ccaj:109789634 493.041