Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1822 ATGTACCACCTGATAAGCACCACGCGCAACTACCTGAAATCGCCGCACGCGTACGCGGCGAAACCCTTCCACCCCTTCCCCTACCCGCGCCGCCTCCAGCTGTACCTGGTCGTCCTCTCCCTCGCGGTGGCCATCGCCCACCACCTCCTCCTCTCGGCGGACTCCGACCCCCTCGTGAAGGGCGCCACCCCCGTCCACCGCCTCGCATCCCTCCAGTCCGCCGCCGcgctcttcctcttcctcctcctcgcCCTCGCCCTCCTCCTCGCCGACGTCTCCCCGCCCTCCTCCCCCTCCCCCACGACCTCGCCTTTGCCCTCGCCTCCGCCCTCTTCCTCCTCCACGCCGCCCTCGCCGCCGCCCGCGCCGCCCTCCAGACCTCCGCCATCGAGGCCAGGTGCCTCGCCGTGTCGGCCAACCTCTCCTACCTCTCCGCCCTCCTCTGCCTCCTCCTCGCCGCCCTCCCCCGCCTCTTCCCCGCCGACGCCGCCCTCGCCGCCGCCTTCTGCCTCCGCGGCCTCTGGGCGCTCCAGACCGGACTCTCCCTCTACGCCGACGCCTTCATCCCCGACGGATGCCACCGCCTCCTCGACGTCGCGAGCGGCGTCGAGGGATCCACGCAGTGCGATCTCGACGAGTCCAAGTTCCGAGCCGTCGCGATTCTCGATCTCGCGTTCTTGA 681 0.6887 MYHLISTTRNYLKSPHAYAAKPFHPFPYPRRLQLYLVVLSLAVAIAHHLLLSADSDPLVKGATPVHRLASLQSAAALFLFLLLALALLLADVSPPSSPSPTTSPLPSPPPSSSSTPPSPPPAPPSRPPPSRPGASPCRPTSPTSPPSSASSSPPSPASSPPTPPSPPPSASAASGRSRPDSPSTPTPSSPTDATASSTSRAASRDPRSAISTSPSSEPSRFSISRS 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1822 226 PANTHER OS11G0534100 PROTEIN 1 92 - -
Ssu4g1822 226 MobiDBLite consensus disorder prediction 97 170 - -
Ssu4g1822 226 PRINTS Proline rich extensin signature 93 109 - -
Ssu4g1822 226 PRINTS Proline rich extensin signature 142 167 - -
Ssu4g1822 226 PRINTS Proline rich extensin signature 115 132 - -
Ssu4g1822 226 PRINTS Proline rich extensin signature 13 25 - -
Ssu4g1822 226 MobiDBLite consensus disorder prediction 93 226 - -
Ssu4g1822 226 MobiDBLite consensus disorder prediction 171 226 - -
Ssu4g1822 226 PANTHER OS11G0534100 PROTEIN 1 92 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1822 - - gmx:100777421 126.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1822 4 33116976 33117656 Ssu4g1822 4 33116976 33117656 ECH