Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1820 ATGGAACCCGAACCCAGATGCATAGAGCTGAAACTCATTTCCTGCAAGGGCCTCACAGCCTTCAACTTCTTCCAAAAACTCACCCTTTACGCGCTCGTCTTCATCGCGAGCGACGACCCCAAGCGGGACCTAACGGACGAACAGAGGCAGCGGCAGAGAACCCTAACGGACAGAGACGGCGACGGCGACGGCGGCAACCCCGAGTGGAACCACGACGCGCGCTTCGATCTGGGGTGGCTCTCGCCGCAAGATTCCGACGTGGACGACCTCTTCCTCCGCTTCGAGTTCCGCCACGACGGCGTCATCCTCGGCAACAAGCTCATCGGCGAGTGCCGCGTGCCGCTCGCCGATCAGGTCCGCGACGCCGACGGCGCGGCCAGGTTCGTCAGCTACGAGGTTCGCTCCGGCGAGGGCAAGCCCAACGGGATCTTCAATTTCTCGTACAGGGTGAAGGGGTGGGGGACCCACTCGTCGCAGATTCTCGAAGGGAGAATCTCCGGGTACCCGGTTCTGGATCCGGCATGCGCTCCCAATCAGGCGCACGTGCAATATCCCACGTGTGAAGTCGAGAACACGTGTTGCTACCCGACGGTTGAGATGCCGGTGGGTTCTGCCGTTTATTCCGCCGCTGTTCCGCCGCCGCCACCGGTTTTGTCTCCGTCGCACGGAGAGTATCATTGTTATTACCCACCACCCCCGCCGCCGCCGCCAGTGGCGTATCCATACCCTCCCCCGCCTCCCCCGGTGGTGCATGCTTACCCGGCTTTTGGGCCGCAGGCCCATCCCTGGCCACCGGGCCCGTATTTTGAACGCAGGTGGTAA 822 0.6277 MEPEPRCIELKLISCKGLTAFNFFQKLTLYALVFIASDDPKRDLTDEQRQRQRTLTDRDGDGDGGNPEWNHDARFDLGWLSPQDSDVDDLFLRFEFRHDGVILGNKLIGECRVPLADQVRDADGAARFVSYEVRSGEGKPNGIFNFSYRVKGWGTHSSQILEGRISGYPVLDPACAPNQAHVQYPTCEVENTCCYPTVEMPVGSAVYSAAVPPPPPVLSPSHGEYHCYYPPPPPPPPVAYPYPPPPPPVVHAYPAFGPQAHPWPPGPYFERRW 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1820 273 Gene3D C2 domain 1 147 IPR035892 -
Ssu4g1820 273 MobiDBLite consensus disorder prediction 43 67 - -
Ssu4g1820 273 PANTHER INGRESSION PROTEIN FIC1 1 265 - -
Ssu4g1820 273 CDD C2_SRC2_like 8 146 IPR044750 GO:0006952
Ssu4g1820 273 PANTHER PROTEIN SRC2-LIKE 1 265 - -
Ssu4g1820 273 ProSiteProfiles C2 domain profile. 1 129 IPR000008 -
Ssu4g1820 273 Pfam C2 domain 8 119 IPR000008 -
Ssu4g1820 273 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 119 IPR035892 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1820 - K22733 gmx:106796391 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1820 4 33099052 33099873 Ssu4g1820 4 33099052 33099873 ECH