LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ssu4g1808	aTGGAATTGGCAATGAAGGTGGCCGAGGCTGTCCATGTGCTGAACCACGATACGCAATCGTGCAACCGCGTCGCAGCCAATCAGTGGCTCGTTCAGTTCCAACAAACCCACGCCGCCTGGGACGTCGCCACCGCCATCCTCACCGCCGATCGCCGCCTCCCCCTCGCCTCCAATTTCGAGGTCGAGTTCTTCGCCGCGCAGATTCTCAAACGCAAGATACAAAATGAAGGTTATCTATTGCAATTAGGAGCTAAGGATGCTTTGTTAAATGCCCTTCTTCTTGCAGTCAAAAGATTCAGTACTGGTCCACCTCAGCTTTTGACACAGATCTGTCTTGCGCTATCTGCTCTTGTACTTCAAGTTGCTGCACATGGAAACCCTATCGAGCAGCTTTTTTACAGTCTCCGGAATCTACAGAGCCAGGACGATGGCAATATTGCTGTCCTGGAGATGCTCACTGTCCTGCCAGAGGAAGTTGTTGACAACCAACGTATcgattctaaaattaattcgTTACACAAAAGCCACTATACGCAAGAGCTTCTCTCCCATACACCGAAGGTTCTTGAGTTCTTGCTGCAGCAGTctgaaataaattttgatggtTCTGTGCAACAACATGAAAGGAACAGGAAAATTTTACGCTGCTTATTGAGTTGGGTTAAATCAGGTTGCTTCTCTGAGATTTCTCAGGGAACATTGCCGGCTCATCCACTTCTAAATCTTGTGTTCAACTCACTGCAGGTTCCTTTATCATTTGATCTGGCCATTGAAGTTCTTGTTGAACTTGTGACTAAACATGAGGGAGTGCCCCAAATTTTGTTATGCAGAGTGCATTATCTGAAGGAAGTACTTCTTTTTCCAGCTCTTACTAGGGGAGACATGAAAGTAATTGGTGGCCTTGCTTGCTTGTTGTCAGAAATTGGGCAGGCTGCTCCATCTCTAATTGTAGAAGCAACTGCAGAGGCACTAACCCTGACAGATGCCCTCTTGAGCTGCGTGGCATTTCCAAGTGAAGATTGGGAGATTGCAGACTCAGCACTGCAGTTTTGGTCCACTCTTGCAAGCTATATACTTGGCATTGATGAAGACGGTGCAAAAAGTAGAAAACATGTGGAAGACATTTTTTCGCCTGTGTTCTCAACATTACTTGATTCGTTGTTATTGCGTTCTCAGGTGGATGATTCTACATACAACGATGAGGGAAGAGTAGTTGATTTGCCTGATGGTCTTATCCATTTCAGGATGAACCTAGTTGAACTATTGGTAGATATTTGTCACCTGTTAGGATCTGCTACATTTATGCAAAAGCTCTTTATTGGTGGGTGGGCATCTCAGAATCTATCAATCCCTTGGAAGGAAGTGGAAAGCAAGCTATTTGCTCTTAATGCTGTTGCTGATGCAATCATACAGGATGGCCAAAGTTATGATTTCTCTGTAGTTATGCAGTTGGTGACCATGTTGTCCACTAAACCTTCTGATGGCTTAAAGGGTTTCATTTGCATTGTATACAGATCTCTAGCAGATGCTGTTGGTTCTTATTCCAAGTGGATATCAGCTTTTAAGGAAAATTTTAGAGCCTTGCTATTATTTCTTGCTATTGGGATTTCAGAACCTCTATCTTCAAATGCTTGTGCATCTGCCTTGCGTAAAGTCTGCGAAGATGCTTCTGTAGTAATTTATGAACCTTCAAATTTGGAAATCTTAATGTGGATAGGAGAGGGTTTAGAGAAGTGGCATTTATCTTTGGAAGATGAGGAAGAAGTTATGCATGCTGTAAGTCTGGTCCTCGGTTCTGTTCCCAATCGAGTACTAAAGAACAACTTATTGGCTAGATTGCTTTCATCTAGCTACGAAGCTATTGGGAAACTTGTTGATCCAGAGATCAGCCTTTCTCTTAAACAGAGCCCTGCTTCTTATACGCAAGTTTTGAATGCTGCCTCTAGAGGGTTGCACAGAATGGGAACTGTATTCAGTCATCTTTCCATATCCGTGGCAACTGAACCTGCTGCAGATGACTCAATACTTTCATTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAAATTTTTGGCTCTGAGCATATGGAGAATGGCAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCAATCTTCAGGTCAGCATTTTGTGACATTACTGCCCAAAGTGCTGGATTGGCTTTcgacaaattttgttttgttccaAAGTCATGAATGCTATATAAGAACTGCTTCCATTGTCATTGAAGAATTTGGTCACCTAGAGGAGTACGGACCTTTATTCGTCACCTCATTTGAAAGATTTACTCATGCAGCTTCAGTAATGGCCCTAACTTCCTCCTACATATGTGACCAAGAACCTGACTTAGTGGAGGCCTACACCAATTTTGCATCAACATTTATCCGATCCTGTAACAAGGATGCCCTATCAGCTTGTGGTTCTCTTCTTGAAGTTTCGATCCAAAAGGCAGCAATATGTTGCACAGCCATGCACCGTGGTGCAGCGCTTGCCGCAATGTCATATTTGTCTTGTTTCTTAGATGTGGGCCTTGTCTCTTTGTTAGAATGTATGAATTGTATTACTGAGGGATCATTCAACATCACAACCATTCATGTCATATCTCACAGTGGTGAGGGGCTTGTATCTAATGTGGTGTATGCTCTACTTGGTGTGTCTGCAATGTCACGGGTTCACAAGTGTGCAACAATTTTGCAACAACTAGCAGCAATTTGCACTTTATCTGAAAGAACAACTTGGAAGGCTATACTTTGCTGGCAAACTCTTCATGGCTGGCTGCAGTCAGCGGTTCAGGCTCTTCCTGCTGAATACCTAAACCATGGAGAAGCAGAGGCCATAGTCCCACTTTGGTCCAAGGCCCTTGCTGATGCAGCCTCTGACTATCTTGAGAGCAAGAACTCTGACGGATTAAAGAGTGATTTCGGGCATATGCAAGGGAAGGGTGGCAGAGTTTTAAAGCGGCTGGTTCGGGAATTTGCTGATGCTCACCGAAATATTCCAAATCTAACTTGA	3039	0.4327	MELAMKVAEAVHVLNHDTQSCNRVAANQWLVQFQQTHAAWDVATAILTADRRLPLASNFEVEFFAAQILKRKIQNEGYLLQLGAKDALLNALLLAVKRFSTGPPQLLTQICLALSALVLQVAAHGNPIEQLFYSLRNLQSQDDGNIAVLEMLTVLPEEVVDNQRIDSKINSLHKSHYTQELLSHTPKVLEFLLQQSEINFDGSVQQHERNRKILRCLLSWVKSGCFSEISQGTLPAHPLLNLVFNSLQVPLSFDLAIEVLVELVTKHEGVPQILLCRVHYLKEVLLFPALTRGDMKVIGGLACLLSEIGQAAPSLIVEATAEALTLTDALLSCVAFPSEDWEIADSALQFWSTLASYILGIDEDGAKSRKHVEDIFSPVFSTLLDSLLLRSQVDDSTYNDEGRVVDLPDGLIHFRMNLVELLVDICHLLGSATFMQKLFIGGWASQNLSIPWKEVESKLFALNAVADAIIQDGQSYDFSVVMQLVTMLSTKPSDGLKGFICIVYRSLADAVGSYSKWISAFKENFRALLLFLAIGISEPLSSNACASALRKVCEDASVVIYEPSNLEILMWIGEGLEKWHLSLEDEEEVMHAVSLVLGSVPNRVLKNNLLARLLSSSYEAIGKLVDPEISLSLKQSPASYTQVLNAASRGLHRMGTVFSHLSISVATEPAADDSILSLLRVFWPILEKIFGSEHMENGNLSVAACRALSLAVQSSGQHFVTLLPKVLDWLSTNFVLFQSHECYIRTASIVIEEFGHLEEYGPLFVTSFERFTHAASVMALTSSYICDQEPDLVEAYTNFASTFIRSCNKDALSACGSLLEVSIQKAAICCTAMHRGAALAAMSYLSCFLDVGLVSLLECMNCITEGSFNITTIHVISHSGEGLVSNVVYALLGVSAMSRVHKCATILQQLAAICTLSERTTWKAILCWQTLHGWLQSAVQALPAEYLNHGEAEAIVPLWSKALADAASDYLESKNSDGLKSDFGHMQGKGGRVLKRLVREFADAHRNIPNLT	1012

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ssu4g1808	1012	SUPERFAMILY	ARM repeat	1	820	IPR016024	-
	Ssu4g1808	1012	Gene3D	-	3	969	IPR011989	-
	Ssu4g1808	1012	PANTHER	TRANSPORTIN 3 AND IMPORTIN 13	1	1011	-	-
	Ssu4g1808	1012	Pfam	Exportin 1-like protein	103	260	IPR013598	-
	Ssu4g1808	1012	PANTHER	ARM REPEAT SUPERFAMILY PROTEIN	1	1011	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ssu4g1808	K15436		-	gmx:100808691	1876.68

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ssu4g1808	4	32859946	32888200	Ssu4g1808	4	32859946	32888200	ECH