Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1806 ATGCCTAGTGGTAGTAGGAATCCTCTTGTTGTTGGGCGTGTTATAGGGGAAGTATTAGACCACTTTGAAAGTTCTATTCCTTTCAGAGTCACCTATGGTAATAGAGAAGTGAGCAATGGTTGTGAGCTAAAACCTTCCCAAGTTGTCAACCAACCCAGAGTGAGTGTTGGCGGAGATGACCTCAGGAACTTCTACACTCTGGTCTTGGTGGATCCTGATGCTCCTAGTCCAAGTAACCCCAGTTGCAGGGAGTACCTTCATTGGTTGGTGACTGATATTCCAGCAACTACTGGGGCTAGTTTCGGTAACGAGGTTGTAAGTTATGAAAGCCCACGACCCACGATGGGGATTCATCGTTTGGTTTTTGTGTTATTACGTCAACAGTATAGACAGAGGGTTTATGCTCCTGGATGGCGACAGAATTTCAATACAAGAGAATTTGCTGAACTTTACAATCTTGGCTTGCCGGTTGCTGCTGTCTTCTTCAACTGTCAGAGGGAAACTGGCTCTGGTGGAAGGACATTTTGA 528 0.4564 MPSGSRNPLVVGRVIGEVLDHFESSIPFRVTYGNREVSNGCELKPSQVVNQPRVSVGGDDLRNFYTLVLVDPDAPSPSNPSCREYLHWLVTDIPATTGASFGNEVVSYESPRPTMGIHRLVFVLLRQQYRQRVYAPGWRQNFNTREFAELYNLGLPVAAVFFNCQRETGSGGRTF 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1806 175 CDD PEBP_euk 27 164 IPR035810 -
Ssu4g1806 175 Gene3D - 3 170 IPR036610 -
Ssu4g1806 175 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 6 174 IPR035810 -
Ssu4g1806 175 PANTHER PROTEIN FLOWERING LOCUS T-RELATED 6 174 - -
Ssu4g1806 175 Pfam Phosphatidylethanolamine-binding protein 52 159 IPR008914 -
Ssu4g1806 175 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 65 87 IPR001858 -
Ssu4g1806 175 SUPERFAMILY PEBP-like 13 167 IPR036610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1806 Ssu-Chr4 32713151 32716866 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1806 K16223 - gmx:100781509 336.65