Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1805 ATGGCACGGGATGGGGACCCTCTTGTTATTGGGGGTGTGATAGGGGATATTCTGAACCCTTTTACAAGCTCGGTTTCTCTGATGGTTGCCATCAATAACAGAGCGATTAGCGATGGCTTGGCAGTGAGGCCCTCTCAAGTTGTTAACCGCCCAAGAGTTACTGTTGGTGGTGAAGACCTAAGGACCTTCTACACACTGGTTATGGTGGACGCAGATGCACCTAGCCCTAGTAACCCTGTCTTGAGGGAATACCTGCACTGGATGGTGACAGATATTCCAGCCACGACAAATGCAAGCTTTGGTATGTCTGTCTATACGGTGACATTAGATTTTTATGCAGGGAGAGAGGTTGTGTTTTATGAGAACCCGCAACCATCAGCAGGGATCCATCGACTTGTGTTTGTATTATTCCAGCAATTGGGCAGAGACACTGTCATCACCCCAGAATGGCGTCAGAATTTCAATTCCAGAAACTTTGCTGAAAACAATAACCTTGCACTTGTCGCAGCAACTTATGTCAACTGCCAGAGAGAGCGTGGTTGCGGTGGAAGGAGAACTTAA 561 0.4759 MARDGDPLVIGGVIGDILNPFTSSVSLMVAINNRAISDGLAVRPSQVVNRPRVTVGGEDLRTFYTLVMVDADAPSPSNPVLREYLHWMVTDIPATTNASFGMSVYTVTLDFYAGREVVFYENPQPSAGIHRLVFVLFQQLGRDTVITPEWRQNFNSRNFAENNNLALVAATYVNCQRERGCGGRRT 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1805 186 CDD PEBP_euk 32 172 IPR035810 -
Ssu4g1805 186 Gene3D - 3 181 IPR036610 -
Ssu4g1805 186 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 1 186 IPR035810 -
Ssu4g1805 186 PANTHER FTC 1 186 - -
Ssu4g1805 186 SUPERFAMILY PEBP-like 12 178 IPR036610 -
Ssu4g1805 186 Pfam Phosphatidylethanolamine-binding protein 62 172 IPR008914 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1805 Ssu-Chr4 32659707 32662566 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1805 K16223 - gmx:100796994 295.434