Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1794 ATGGCTGAGATTTTGAGCAAGACAAGTTTGGTTTCTTCGTGGCATGGGAATAGTCAACAACATCATCGAAGGGTTTCAATGGTTCCCAAGACTTGTAGCTTCGTTTCTGGGGTGGGAAGGTTCCCTTCTCTGAAACTGAAGTCTCAGATTCTCAGATCTTGGTCCTCTTCTTCTGAGTTTCAGGGTAAAAAGCTTGTGTTTCGTGTAAATAGAGGAACACCCAATAGGGCTAATTCGAGATTGAGAGCTTCAACTGGGGCTCAGATGACCCTTAGAATAGGGAAAGTTCAGAAGTGGTGGGAAAAAGGGCTTCAACCCAATATGAGAGAGGTGACTTCGGCACAAGACCTTGTGGAATCACTGTTAAGTGCTGGGGACAAATTGGTGGTGGTTGATTTCTTCTCTCCTGGTTGTGGTGGCTGCAAAGCCCTTCATCCTAAGATATGTCAATTGGCAGAGATGAATCCTGAGGTTCAGTTCCTTCAGGTGAACTATGAGGAGCATAAGTCCATGTGTTATAGCCTTAATGTCCATGTCCTTCCCTTCTTCCGCTTCTATAGAGGTGCTCATGGTCGATTATGCAGCTTTAGCTGCACCAATGCCACGATCAAGAAGTTTAAAGATGCATTGGCCAAACACTCCCCAGATAGATGCAGCTTGGGCCCAATCAAAGGGTTAGAGGAGAAAGAGCTCCTAGCTCTTTCTGCCAACAAAGATCTTTCCTTCACTTATTCACCAAAACCTACACTACCTGCACATGCCCCTGCAAATGAAGGGTTGGGAACCAAAACTGCTCCTGCTCCTAGTTCAGAATCTCTTCCTTTACCTTCATTGACCCTCAATTCTGAGGTCTCCAAAGAGAGAACCCTGACCACTGCCGGGAGATGA 888 0.4606 MAEILSKTSLVSSWHGNSQQHHRRVSMVPKTCSFVSGVGRFPSLKLKSQILRSWSSSSEFQGKKLVFRVNRGTPNRANSRLRASTGAQMTLRIGKVQKWWEKGLQPNMREVTSAQDLVESLLSAGDKLVVVDFFSPGCGGCKALHPKICQLAEMNPEVQFLQVNYEEHKSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFKDALAKHSPDRCSLGPIKGLEEKELLALSANKDLSFTYSPKPTLPAHAPANEGLGTKTAPAPSSESLPLPSLTLNSEVSKERTLTTAGR 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1794 295 MobiDBLite consensus disorder prediction 263 295 - -
Ssu4g1794 295 CDD TRX_family 124 188 - -
Ssu4g1794 295 PANTHER THIOREDOXIN, MITOCHONDRIAL 1 295 - -
Ssu4g1794 295 ProSiteProfiles Thioredoxin domain profile. 77 215 IPR013766 -
Ssu4g1794 295 PANTHER THIOREDOXIN-LIKE 1-3, CHLOROPLASTIC 1 295 - -
Ssu4g1794 295 SUPERFAMILY Thioredoxin-like 97 213 IPR036249 -
Ssu4g1794 295 Pfam Thioredoxin 119 190 IPR013766 -
Ssu4g1794 295 Gene3D Glutaredoxin 101 218 - -
Ssu4g1794 295 MobiDBLite consensus disorder prediction 249 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1794 Ssu-Chr4 32325904 32327984 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1794 - - var:108327816 481.87