Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1790 ATGGCACAGTTCACTACGCAGGGTCGCCTAAAGCTGCTCTTCACTGGGGAGGGTGTGTCTTCTGTTTTGGAGCACAAGGACCCTTTTCTCTACAAGTGCAGGTCAGTTCAGACCCACAAGCGAAGAACAAGGTGCATGGGTTCTTCTGCTAGAATTTACTATGCATCATCTCTGAGTAACAAAACCAATCGTTGTAATGCGGAGGCACGCGCCACTTCTGGCAATGGGAGTGTTCATGATGAACAtgatgatgaggaggatgaGGATGATGATGTGTTTGACCGAGATGGCTTGTCTTGCTTCCGGGGTTTGGTGTTGGACATAGCTTACAGGCCAGTAAATGTCGTAGGCTGGAAACGTGCTATATGTTTGGAGTTTATGGAGAAGGCTGATGTACTGGAGTATTATGCCAAGACAGTGAACTCCCCCAGTGGATCTTTCTATATACCAGCTGTCTTAAGGGTTCCTCATTTACTTCAGGTTGTTAAAAGAAGAATAGTCAAGAACAATCTTAGTcgaaaaaatatactatttcgGGACAATTACACCTGTCAGTATTGCTCTTCGCGAGAGAATTTGACCATTGATCATGTTGTGCCCACTGCACTAGGTGGAGAATGGACATGGGAAAATCTGGTAAGCTAA 645 0.431 MAQFTTQGRLKLLFTGEGVSSVLEHKDPFLYKCRSVQTHKRRTRCMGSSARIYYASSLSNKTNRCNAEARATSGNGSVHDEHDDEEDEDDDVFDRDGLSCFRGLVLDIAYRPVNVVGWKRAICLEFMEKADVLEYYAKTVNSPSGSFYIPAVLRVPHLLQVVKRRIVKNNLSRKNILFRDNYTCQYCSSRENLTIDHVVPTALGGEWTWENLVS 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1790 214 Gene3D - 160 214 - -
Ssu4g1790 214 PANTHER SLL1193 PROTEIN 35 213 - -
Ssu4g1790 214 Pfam HNH endonuclease 184 212 IPR029471 -
Ssu4g1790 214 SMART HNH_5 171 214 IPR003615 -
Ssu4g1790 214 CDD HNHc 173 213 IPR003615 -
Ssu4g1790 214 MobiDBLite consensus disorder prediction 66 91 - -
Ssu4g1790 214 PANTHER SLL1193 PROTEIN 35 213 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1790 - - gmx:100787021 377.867