Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1782 ATggcttcttttctttccttatctcttcccaaattaaacttaataaaggCCTCCTCAGCAGccaacacctccaccaccactctTCCCGCTGCTGAGGCACTCAATGAGAAATTTAGCAGAAAAGGCATCAAGTTCTTGGAGTCTGACAACATCCCCGTTGTTGAGCTAACAATCAGAAATGGCAGCTCCTTGAGGCTAAGGATACCTGATGCTCATGTGACATCATACAAACCAAAAGTTCATTGGAAAGATGATGGCCTCCAGGAGGTTCTTTACACAATTCCTGCAACTGAAACAGGCCCTTACAAAGCCAAAGGTGGGGTTGGTTTGGTCATGAATGAAGTACTGCAACCTGGAGCCAAAGGGTTACTCCCTTCCACTCTAGAGTGGACACTAAACGATGTTGATTCTGATTCCATAGATGCTCTCCAGGTTGAATTGAGCTGCACTAGTAGATTCTTTGACATCACTTACATCGTGACTCTCTATCCTGTGAGCATGGCCACAGCAGTTGTAGCTAAGAACATAGGCCCCAAGCCTGCCACTCTAACCAATGCTATTCTAAGCCATTTTAGATTTAAGAAAAGAGGTGGGACAGCAATTCAAGGCCTCAGAAGCTGCTCATACTGCCCACACCCTCctctctcttctccttttcAAATCTTGACTCCATCAGAAGCTATGATATCTGAGCCTCCTAAATGGTTTTCCTTTGGTAATGAACCTGAAGCCAAGCCTGGCACGTGGGGTCAACAAGCTTTGTCTATTACCCTCCTTGAGAATAAGATGAGTAGAGTTTATGCTGCACCTCCAAAGGAAAGATCCAAGGCATTCTATAACACCCCACCTTCCAAGTATGAAACCATTGACCAGGGACGTGGACTTTGCTTCAGGGTGATAAGAATGGGTTTTGaggatatttatttatcaagtccTGGTTCCTTGTCAGAGAAATATGGAAAGGACTATTTCATCTGCACTGGCCCTGCTTCAATACTGGTGCCTGTGACTGTGAATCCTGGTGAAGAATGGAGAGGGGCACAAGTTATTGAGCATGACAATTTGACATGA 1071 0.409 MASFLSLSLPKLNLIKASSAANTSTTTLPAAEALNEKFSRKGIKFLESDNIPVVELTIRNGSSLRLRIPDAHVTSYKPKVHWKDDGLQEVLYTIPATETGPYKAKGGVGLVMNEVLQPGAKGLLPSTLEWTLNDVDSDSIDALQVELSCTSRFFDITYIVTLYPVSMATAVVAKNIGPKPATLTNAILSHFRFKKRGGTAIQGLRSCSYCPHPPLSSPFQILTPSEAMISEPPKWFSFGNEPEAKPGTWGQQALSITLLENKMSRVYAAPPKERSKAFYNTPPSKYETIDQGRGLCFRVIRMGFEDIYLSSPGSLSEKYGKDYFICTGPASILVPVTVNPGEEWRGAQVIEHDNLT 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1782 356 SUPERFAMILY Galactose mutarotase-like 43 350 IPR011013 GO:0003824|GO:0005975|GO:0030246
Ssu4g1782 356 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 2, CHLOROPLASTIC 18 355 - -
Ssu4g1782 356 Gene3D - 50 356 IPR014718 GO:0030246
Ssu4g1782 356 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 18 355 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1782 - - gmx:100788455 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1782 4 32062160 32063719 Ssu9g0248 9 13346767 13349188 PCT