Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1781 ATGGCAGCTGTTGCTCCTTCTTCTGACAAAACTGCAGATTTACTGCAGAATTTGACTCTGGATTCCGAGTCCAAAACCATTGGAGCTGTGGAGTCAGCAACGAAGAATGGACCTGTGTTTTCCAATGGTGCAGCTAAGGGGATGGCCAAGCCGTTCAATCCGAATTCATGCTTTGTTCCGAATGGATACCCTTCTACTGCATACTATTATGGAGGTTATGATGGGCAAGGTGACTGGAATGTTTATTCCAGATATATGAACCTTGATGGAGGGATGGCTCAAGGTGTTTATGGGGATAACTGCTCTTATATGTATCATCAAGGTTATGGTTATACACCATATGGAACCTATGCACCACCCAATTCTTCTTCTCCAATCATTCAACAAGATGGTCAGCATTATGGGCTGCAACAGTACCAGTATCCTTGTTCTTATTACAAATCTCCAGCTTTTGCTGATGTATCATTTTCTCCAAACAAAATCAGTGTACCACAAGGAGAAATATCAACTGCAATTGATGCTGATCATGTTGCTTCATCGAATGTTATGAATAAAGGAAACACTGTTAACATGCCCAACAGtgattttacaaataaaaatgggtTAAAGCCATTTTTAACTAGTTCCCAGCGCACATCTTTGAATACAAATGATTCTTATGAAGGGACTAGCTTGCCAGCTTATGCTCCTTTGTCAGGATATCAGGGTCCAAGAATAAGTACTCATGGTACACAGTTGCCAGTCCGTTCAGATGTGTCCTTAGTATCTGATAGACAGTCCAAACATGGAGCCAAGGTTGGATCAGTAGTGCCTGCCAAAGATTTTACATCTCAAAGGAATCAAAGACTTCCTCAGCCATTTCCACAATTTGCGAACATGAATGGTTCCAGACATCCATCTGAACTTGAACTGGTTTCTGGATTCATGAACGGGATGTATCCAACCAACAGGATGTACAGCCAATATGGAAACACATTTAGGGCTAATTCTCGTTTTGGATCTGCTGCATATGGATCTAGAGTGGGCACTTTTGATAACAAGCTTAATGCCACAGGTGATGGCTACGGTcttaaccattttaaaaaaaatatggatggTTTCAGTGAGCTAAATAAGGGACCCAGAGCTGCCAAGAGTtctgataataaaaatatcaaaagtctTGGACCTGTCACATTATTACTCAAAGGACAGAACCTTCCAGTGAAGGGTGATAACAAAGAAGTTCCTCTGGTTCCCAATAAGGAACAGTACAACGGGAAGGATTTTTCTGAGAATTATTCTGATGCCAAGTTTTTTGTCATCAAATCCTATAGTGAGGATGATATTcataaaagcataaaatataGTGTTTGGGCAAGCACCCCTAACGGCAATAAAAAGCTGGATGCGGCATATCAGGAAGCCAAGGAGAATACTGGTGGCTGTcccatatttttgttattttcgGTCAACACTAGTGGGCAATTTGTTGGTTTAGCAGAGATGGTGGGTCCTGTTGATTTTGGAAAAACTGTAGATTATTGGCAGCAGGACAGGTGGACTGGTTGCTTTTCTGTGAAGTGGCATGTCATAAAGGATATTCCAAATAGTGTGTTGAGGCACATAACACTAGACAACAATGAAAACAAACCTGTTACAAACAGTAGGGATACTCAAGAGGTTAAGTTTGAGAAGGGTGTTgaaattgtcaaaattttcaaggaGCATTCATGTCAAACATGCATCTTGGATGATTTTGGGTTTTACGAGACTCGGGAAAAGGCGACTCAGGAGAAAAAATCTAAGGAACAGCAGATCCCAAAACAGGTCAGCAAGCCCAGTGATTTAACATTTGGGACAGTTACATTGCCAAAGTCTCTTGATGCAACCTTGATGAATGAATCTGCTACTGCAAATGCAGAAGGAAGAATGAATGCAGAGGGGCTGTTAGGAGGGAATGGATCCACCACAGCACTTGAAGACTCTTCTAAGAGCTGTTAA 1983 0.3938 MAAVAPSSDKTADLLQNLTLDSESKTIGAVESATKNGPVFSNGAAKGMAKPFNPNSCFVPNGYPSTAYYYGGYDGQGDWNVYSRYMNLDGGMAQGVYGDNCSYMYHQGYGYTPYGTYAPPNSSSPIIQQDGQHYGLQQYQYPCSYYKSPAFADVSFSPNKISVPQGEISTAIDADHVASSNVMNKGNTVNMPNSDFTNKNGLKPFLTSSQRTSLNTNDSYEGTSLPAYAPLSGYQGPRISTHGTQLPVRSDVSLVSDRQSKHGAKVGSVVPAKDFTSQRNQRLPQPFPQFANMNGSRHPSELELVSGFMNGMYPTNRMYSQYGNTFRANSRFGSAAYGSRVGTFDNKLNATGDGYGLNHFKKNMDGFSELNKGPRAAKSSDNKNIKSLGPVTLLLKGQNLPVKGDNKEVPLVPNKEQYNGKDFSENYSDAKFFVIKSYSEDDIHKSIKYSVWASTPNGNKKLDAAYQEAKENTGGCPIFLLFSVNTSGQFVGLAEMVGPVDFGKTVDYWQQDRWTGCFSVKWHVIKDIPNSVLRHITLDNNENKPVTNSRDTQEVKFEKGVEIVKIFKEHSCQTCILDDFGFYETREKATQEKKSKEQQIPKQVSKPSDLTFGTVTLPKSLDATLMNESATANAEGRMNAEGLLGGNGSTTALEDSSKSC 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1781 660 MobiDBLite consensus disorder prediction 636 660 - -
Ssu4g1781 660 ProSiteProfiles YTH domain profile. 430 567 IPR007275 GO:0003723
Ssu4g1781 660 PANTHER EVOLUTIONARILY CARBOXY-TERMINAL REGION PROTEIN 1 660 - -
Ssu4g1781 660 Pfam YT521-B-like domain 430 568 IPR007275 GO:0003723
Ssu4g1781 660 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 1 660 IPR045168 -
Ssu4g1781 660 Gene3D ph1033 like domains 411 581 - -
Ssu4g1781 660 MobiDBLite consensus disorder prediction 644 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1781 Ssu-Chr4 32056684 32060716 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1781 - K20102 gmx:100818027 1176.39