Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1775 ATGTCAACTCTGAGCAATTCGACAAATATATTTTGGCAAGATTGCCAAATAGGAAGGCCTGAAAGGCAGAAGCTACTTAACCAAAAGGGATGTGTTGTATGGATTACTGGGCTCAGCGGATCAGGAAAAAGCACATTGGCATGTTCCCTAAGCAGAGAACTGTACTCAAGGGGAAAGTTATCTTATGTCCTTGATGGAGATAACCTTCGGCATGGACTAAACAAGGATCTTGGTTTTAAACCTGAAGATCGCACTGAAAATATTCGCAGAACTGgAGAAGTGGCACAACTCTTTGCCGATGCTGGTTTAATATGTGTTGCCAGTCTGATATCTCCTTACAGAAGAGATAGAGACACTTGCCGTGCCATGTTACCTGACGCAAATTTTATTGAGGTCTTCATGAACATGCCTTTAGAATTGTGTGAGGCACGAGATCCAAAAGGCCTCTATAAGCTTGCTCGTGCGGGAAAAATCAAAGGTTTTACCGGCATTGATGATCCTTATGAACCACCCATAAATTGTGAGATTGAAATAAAGCAGGATGATGGCGTTTGTCCAACGCCCACAGTGATGGCTGGACAAGTAGTTACTTACTTGGAGAAGAAAGGATTTCTTGAATATTAG 624 0.4215 MSTLSNSTNIFWQDCQIGRPERQKLLNQKGCVVWITGLSGSGKSTLACSLSRELYSRGKLSYVLDGDNLRHGLNKDLGFKPEDRTENIRRTGEVAQLFADAGLICVASLISPYRRDRDTCRAMLPDANFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPINCEIEIKQDDGVCPTPTVMAGQVVTYLEKKGFLEY 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1775 207 Hamap Adenylyl-sulfate kinase [cysC]. 28 203 IPR002891 GO:0000103|GO:0004020|GO:0005524
Ssu4g1775 207 Gene3D - 2 206 IPR027417 -
Ssu4g1775 207 TIGRFAM apsK: adenylyl-sulfate kinase 12 182 IPR002891 GO:0000103|GO:0004020|GO:0005524
Ssu4g1775 207 CDD APSK 32 179 IPR002891 GO:0000103|GO:0004020|GO:0005524
Ssu4g1775 207 PANTHER ADENYLYL-SULFATE KINASE 1, CHLOROPLASTIC 1 206 - -
Ssu4g1775 207 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 201 IPR027417 -
Ssu4g1775 207 Pfam Adenylylsulphate kinase 29 181 - -
Ssu4g1775 207 PANTHER BIFUNCTIONAL 3'-PHOSPHOADENOSINE 5'-PHOSPHOSULFATE SYNTHASE 1 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1775 Ssu-Chr4 31929617 31933598 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1775 K00860 - gmx:100793200 408.297