Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1774 ATGAAGAGCATAGTGACGCCATTGACGAGGGTCTCCTTATTTTGTCACCCAAATGGCCATAAAGCCCTTCCCTTCTCTCTCACACGCTACCCTTCCTCACCAAACACAAACACCTCTTTCTCCCCTCTCACTCTCACTCTTTCCATGGCCGCTTCACCCCAATCCTCCGCTCCGACTGTGTCGCCTGGTGACGTTAACATCGACAAAGATGGTGTCTTTCAATTGATTCAAGCACATCAGGAAAAAGCTGCTAGACTTCCACCAGTTGAGGAAATTCGAACTGTCCTTGATCGTAGCGTGCGAGGGATGCTCTCTACATTCTCTAAGAAGTTTGATGGTTATCCATCAGGGTCTATGGTTGACTTTGCGTGTGATGCAAATGGATATCCTATATTAGCAGTGAGTGACCTGGCAGTTCATTCaaaggACCTAACTGCCAATCCTAAATGTTCATTGCTTGTGGCTAGAGATCCTGAAGATAGGACTGATTTAGTGATTACTTTACATGGTGATGCTATCACTGTACctgaaaatgataaagaagCTGTTCGAGCTGCATATTTGGCGAGACATCCCAATGCATTTTGGGTTGACTTTGGAGACTTCCGATTCTGGCGCATTGAACCGAAAGTTGTACGATTTGTGTCAGGTGTTGCCACAGCTTTGTTAGGATCAGGAGaGTTTAGTGGAAATGAGTATAAATCTACAAAAGTTGACCCCATAGCTCAGTTTTCCAAGCCAGTGGCGTCTCATATGAACAAAGATCATGCTGAAGATAACAAAGTCATTGTGCAGCATTGGACCTCAGTTCCAGTGGACTTTGCCTACATGCTAGATTTGGATAGTCTTGGTTTCAATGTTAAGgctGGTTATCAGGGTGATACTTTCAAGCTTCGTGTACCTTTCCCTCGACGTGCAGAAGATAGAAAGGATGTGAAGACTCTCATTGTTGAGATGCTTCAAGCTGCTAGGCCTAAAGTTGATTGA 987 0.4367 MKSIVTPLTRVSLFCHPNGHKALPFSLTRYPSSPNTNTSFSPLTLTLSMAASPQSSAPTVSPGDVNIDKDGVFQLIQAHQEKAARLPPVEEIRTVLDRSVRGMLSTFSKKFDGYPSGSMVDFACDANGYPILAVSDLAVHSKDLTANPKCSLLVARDPEDRTDLVITLHGDAITVPENDKEAVRAAYLARHPNAFWVDFGDFRFWRIEPKVVRFVSGVATALLGSGEFSGNEYKSTKVDPIAQFSKPVASHMNKDHAEDNKVIVQHWTSVPVDFAYMLDLDSLGFNVKAGYQGDTFKLRVPFPRRAEDRKDVKTLIVEMLQAARPKVD 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1774 328 Pfam Domain of unknown function (DUF2470) 246 319 IPR019595 -
Ssu4g1774 328 SUPERFAMILY FMN-binding split barrel 90 324 - -
Ssu4g1774 328 Pfam Pyridoxamine 5'-phosphate oxidase 93 216 - -
Ssu4g1774 328 PANTHER OS07G0573800 PROTEIN 20 325 - -
Ssu4g1774 328 Gene3D - 66 223 IPR012349 -
Ssu4g1774 328 PANTHER CREG1 PROTEIN 20 325 - -
Ssu4g1774 328 Gene3D - 238 327 IPR037119 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1774 Ssu-Chr4 31916564 31921404 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1774 - - gmx:100792427 610.142