Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1773 ATGGAGACAGAAGAGAGGAACCAGAAAGGGTGCAAGGCTTCGGAGCCGGAGTTTTTCTTGCAGTGGGGGAACAGGAAGCGCCTGAGATGTGTGAGGGTGAAGGACCCTCGGATTTCGGCGAGGCTCAACGGTGGAATCAGAAGGAAACTCACTTCTGCGGTGGATCATCGTTCTGGGGTCACTCTGGCAGAGAAAGAAACCACTCATCATCAACCTAATCGCCTTACAAGGAATTCCGACGGGGCGATTCTCCGGTCGTCGGCCGGCGAGAACAGGAAATCGGCGTCGCCGGAGAAGGAGGACCGGTACTACACAACGAGGGGTTCAGCGGAGGAGAACGGCAAAGTCTCCGGCGACGGTAACAACGGCGAGGAAAGATCCCTTGTTTGGCCCAAGCTTTACATCACTCTCTCTAGCAAGGAGAAGGAAGAGGATTTTCTTGCCATGAAGGGTTGCAAGCTTCCTCAGCGACCCAAAAAGAGGGCTAAGATCATCCAAAGAAGCTTACTTGTAAGTTGTTTTGTTTCTCTCcttgtaaaaaacaaaaaagagggtattttgtttttgtgggAAAAAGGGGAAATTGTGGTGGGTGATTTGGGTTGGGATCTTTATGCTCACCACCTTATCTTGTCTTTGTTTGTTGGTGTTGGGTTACAGTTGGTGAGCCCTGGGGCGTGGTTGACTGATATGTGCCAAGAGAGATATGAAGTTAGGGAGAAGAAAAGTAACAAGAAGGTACGTGGTTGGTGGTGTGGTAGTGTGTGGAGTTGTTACCTTACTTTTGTGACTAGATCTACAACTTGTATATATACCACACgccttatttattctttttttttttttttctccccttGGGTTTTGGATGCAGAGACCAAGAGGTTTGAAGGCTATGGGAAGCATGGAAAGTGA 912 0.4572 METEERNQKGCKASEPEFFLQWGNRKRLRCVRVKDPRISARLNGGIRRKLTSAVDHRSGVTLAEKETTHHQPNRLTRNSDGAILRSSAGENRKSASPEKEDRYYTTRGSAEENGKVSGDGNNGEERSLVWPKLYITLSSKEKEEDFLAMKGCKLPQRPKKRAKIIQRSLLVSCFVSLLVKNKKEGILFLWEKGEIVVGDLGWDLYAHHLILSLFVGVGLQLVSPGAWLTDMCQERYEVREKKSNKKVRGWWCGSVWSCYLTFVTRSTTCIYTTRLIYSFFFFFSPWVLDAETKRFEGYGKHGK 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1773 303 PANTHER PUTATIVE (DUF1639)-RELATED 1 172 - -
Ssu4g1773 303 PANTHER DUF1639 FAMILY PROTEIN 219 246 - -
Ssu4g1773 303 PANTHER DUF1639 FAMILY PROTEIN 1 172 - -
Ssu4g1773 303 MobiDBLite consensus disorder prediction 74 91 - -
Ssu4g1773 303 MobiDBLite consensus disorder prediction 57 124 - -
Ssu4g1773 303 MobiDBLite consensus disorder prediction 92 108 - -
Ssu4g1773 303 MobiDBLite consensus disorder prediction 57 73 - -
Ssu4g1773 303 Pfam Protein of unknown function (DUF1639) 137 173 IPR012438 -
Ssu4g1773 303 PANTHER PUTATIVE (DUF1639)-RELATED 219 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1773 Ssu-Chr4 31910876 31912416 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1773 - - gsj:114400333 339.732