Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1771 ATGGCCACCTCGCTTCTTCTTATCTTCAtcacttgtttcttttttctaccATCctcatattcttcttcttctccaccTTCTGCTTCCTTTCTCTATGAGCTTCAATCTCAATGCTTCCTCCCCTTCTCCCCTGACCCTCCTCTTCAGGTGGATGGGAATTTCATAGAAGGGGTTTTGTGTGGCAGAAAGATGGTTGGATACGTTTCTATACTCTTCTATGCTTCCTGGTGCCCTTTTTCACGCAAAATGCTTCCTGAATTTGAGATTCTTAGTTCCATGTTTCCTCAAGTAGAACATGTGGCACTTGAGCAATCATCAGCTTTGCCAAGcttatattcaaaatatggAATCCATAGCTTGCCTGCTATCTTACTGGTGAACCAGACATCTAGGGTGAGATATCATGGTCCAAACAATCTTAGCTCCCTTGTAGAATTTTATGAGAGAAACACAGGATTAGAAGCCAGGGACAAGGTTGTTTTTGCTCAACTAAGCAACTTGATGAGTGATGAACATTCAACTATGAAGGGCTTCTCCCTCAAAGAAATGTCAAGCAGGGAACCTTACTTGGCATTATCTATATTGTTTCTCTGCTTGAGGACTATTCTCTTTGTATTTCCTGCGATTGTGTCGCGTCTCCAAGCATTCTGGACTTCCTTTGTTCCTCATTTGAACTTGCAAGTATTTGGCCTAGTGATGGAACGTGTTCTTATTGTAATTGATGTCAAGAGGATTTGGACCAAGCTAAGACTATGCAAGACCAGGAACTTTCATGAAAGGGCAAGGAGTGCCCGGGTTAGGGCAAGGAGTGCCCGGGTTTGGGCATCATCTCTGGCTTCTGTTTCTCTGGGTGACTCATCAGCTAGGTGA 870 0.4092 MATSLLLIFITCFFFLPSSYSSSSPPSASFLYELQSQCFLPFSPDPPLQVDGNFIEGVLCGRKMVGYVSILFYASWCPFSRKMLPEFEILSSMFPQVEHVALEQSSALPSLYSKYGIHSLPAILLVNQTSRVRYHGPNNLSSLVEFYERNTGLEARDKVVFAQLSNLMSDEHSTMKGFSLKEMSSREPYLALSILFLCLRTILFVFPAIVSRLQAFWTSFVPHLNLQVFGLVMERVLIVIDVKRIWTKLRLCKTRNFHERARSARVRARSARVWASSLASVSLGDSSAR 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1771 289 Gene3D Glutaredoxin 50 161 - -
Ssu4g1771 289 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 7 4 288 - -
Ssu4g1771 289 ProSiteProfiles Thioredoxin domain profile. 39 152 IPR013766 -
Ssu4g1771 289 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 7 4 288 IPR044794 -
Ssu4g1771 289 Pfam Thioredoxin 68 147 IPR013766 -
Ssu4g1771 289 SUPERFAMILY Thioredoxin-like 30 150 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1771 Ssu-Chr4 31851574 31857017 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1771 - - gmx:100795848 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1771 4 31851574 31857017 Ssu9g0229 9 12918325 12928819 PCT