Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1766 ATGAAAACAGGTTGTTCCATATCTCCTTGCATACGCGTCAATGCGTGTGTGACCGACACGTCACAAAATGTCTCATCCAGTGGATCCGGAAAATGCTATAAATACCTCCAACACAACCCAATACAAATAAGTCACCTACGTTCCAGAAGCTGCTCCTCAGTTTCTCCAAACCCGAGCTTTAACGACAGGGACCTGTCAGATTTAGTTAAGGTTTTTACATCATCACTGAATAAAGATAATATAGATATGGAAGTCTCCCATGACTTCAAGATCAAGGATGACAAGCCAGGTGATGTGAAGGAAGAGAAGATTAAGGTAGAACTGGAACTGAAGAATAAATCAGTTGAGAAAGAGCATCCAAAAAGTAAGGCAGagaagaaacataaagatgaagataaatcaaagaaaaagaagaaaggaaaggaggaagaggaagaggaagagggagagaagaaagaaaaagatttagaaGATAAAGGGGGGGAtgatgaagagaaaaagaaaaaggagaaggagaaggagaagaataaaaaggaaaaaaaagacaagGATGACAAAACTGATGCAGAGAAGGTCAAGGGGAAAGAAGATGATGGGGAGGATgatgaagagaagaaggaaaagaaggagaaggaaaagaagaaaaaggaaaagaaagacaatGATGACAAAACTGATGCAGAGAAGGTCAAGGGGAAAGATgatgaagagaagaaggaaaagaaggagaaggaaaagaagaaaaaggaaaagaacgAAAAGGATGACAAAATTGATGTAGAGAATGATAAGGATAGAAAAGATGATGGGGAGGATggtgaagagaagaagaaaaagaaggacaaggagacgaagaaaaaggaaaagaaggacaaagaaaaagaaggagatggtgatggtgaagagaagaaggaaaagaaagagaaggagaagaaaaaggaaaagaaggacAAGGATGAAGAAACAGACACATTaaaggaaaagggaaaagaTGACGAAGATGAGGATGGtggagaaaataagaaaaagaagaaaaaggataaGAAGGAGAAGGATCacaaaaaggagaagaaggatAAAGATGAGAAGGGGGATGGAAAAGAAGAGGGTGAGAAAGAGGATGGCAAGGTTGAAGTTTCTGCAAGGGATATTAATATAGAAGAAATCACAAAGGAAggtgaaaaagaagataaagaaaaggATGGTGGGAAGGAAGTgaaagagaagaggaaaaaagaagacaaagacaagaaggagaagaagaaaaaacttaCTGGAAAGGACAAGACCAAGGATCTTAGCAAGCTGAAGCAAaagcttgaaaaaattgacGGAAAAATAGAAGCACTCCTGGAAGAGAAGGCTGATATAGAAAGGCAGATAAAAGAAGCCGAAGCTGAGGGTCATGTAGTCAACGAGAAGAACAAGGATGAGGTGACACTTGAGTCACCACACGTGAATGGGCCAAATATTAGACAAGTAGCAAACTTGTACAAAGTTTTGATAAGAAATGAAGTGTATCGAAGAAGTCTCACAAAATCAAAGACTTTTGCTCACTTTATGAAAGACATGCCTCTGAAAAGAAAATGTGCAAAGTTTGATAAACCAGAACTTTGTAGTCTGACTCACGACGCCAAtacgagaaaagaaagataa 1656 0.2627 MKTGCSISPCIRVNACVTDTSQNVSSSGSGKCYKYLQHNPIQISHLRSRSCSSVSPNPSFNDRDLSDLVKVFTSSLNKDNIDMEVSHDFKIKDDKPGDVKEEKIKVELELKNKSVEKEHPKSKAEKKHKDEDKSKKKKKGKEEEEEEEGEKKEKDLEDKGGDDEEKKKKEKEKEKNKKEKKDKDDKTDAEKVKGKEDDGEDDEEKKEKKEKEKKKKEKKDNDDKTDAEKVKGKDDEEKKEKKEKEKKKKEKNEKDDKIDVENDKDRKDDGEDGEEKKKKKDKETKKKEKKDKEKEGDGDGEEKKEKKEKEKKKEKKDKDEETDTLKEKGKDDEDEDGGENKKKKKKDKKEKDHKKEKKDKDEKGDGKEEGEKEDGKVEVSARDINIEEITKEGEKEDKEKDGGKEVKEKRKKEDKDKKEKKKKLTGKDKTKDLSKLKQKLEKIDGKIEALLEEKADIERQIKEAEAEGHVVNEKNKDEVTLESPHVNGPNIRQVANLYKVLIRNEVYRRSLTKSKTFAHFMKDMPLKRKCAKFDKPELCSLTHDANTRKER 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1766 551 PANTHER NEUROFILAMENT TRIPLET M PROTEIN-LIKE PROTEIN 116 475 - -
Ssu4g1766 551 Coils Coil 433 474 - -
Ssu4g1766 551 Coils Coil 227 264 - -
Ssu4g1766 551 Coils Coil 161 189 - -
Ssu4g1766 551 MobiDBLite consensus disorder prediction 111 433 - -
Ssu4g1766 551 Coils Coil 192 221 - -
Ssu4g1766 551 Coils Coil 275 295 - -
Ssu4g1766 551 MobiDBLite consensus disorder prediction 352 433 - -
Ssu4g1766 551 Coils Coil 301 328 - -
Ssu4g1766 551 MobiDBLite consensus disorder prediction 111 345 - -
Ssu4g1766 551 Coils Coil 139 159 - -
Ssu4g1766 551 PANTHER GLUTAMIC ACID-RICH PROTEIN-LIKE 116 475 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1766 - - gmx:100778761 175.637