Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1758 ATGGTCCTTCTAAAAAATGGTGATGAATCTGCTGAGAAGCCTTTATTGCCTCTTCCTAAAAAGGTGCCAAAAATACTTGTGGCTGGAAGCCATGCAGATAATCTAGGATATCAGTGTGGTGGCTGGACCATAGAATGGCAAGGAGTCAGTGGGAACAATCTTCTCCAAGGGACAACAATTCTCACTGCTGTGAAAAACACTGTTGATTCTGAAACCATAGTGGTCTACAAGGAGAACCCTGATGTAGAATTTGTTAAATCCAATGGATTTTCCTATGCCATAGTTGTAGTAGGGGAGCACCCTTATGCTGAAATGCATGGTGACAGCATGAACTTGACAATCCCAGACCCTGGTTATGAGACCATAACAAATGTCTGTGGAGCAATAAAATGTGTGGTTATCATTATTTCTGGTCGTCCTGTAGTCATTGAACCATACGTTGGTTTAATAGATGCACTTGTTGCTGCTTGGCTCCCAGGTAGCGAAGGCCAAGGTGTGGCTGATGTTTTATTTGGTGACTATGGTTTCACAGGAAAGCTTCCAAGGGCATGGTTCAAAACTGTTGATCAACTGCCAATGAATGTTGGGGATCCTCATTATGATCCCCTCTTCCCATTTGGGTTTGGCCTTTATACCGAACCTACTAAGGCTTTGTACTCCGCGTAG 666 0.4354 MVLLKNGDESAEKPLLPLPKKVPKILVAGSHADNLGYQCGGWTIEWQGVSGNNLLQGTTILTAVKNTVDSETIVVYKENPDVEFVKSNGFSYAIVVVGEHPYAEMHGDSMNLTIPDPGYETITNVCGAIKCVVIIISGRPVVIEPYVGLIDALVAAWLPGSEGQGVADVLFGDYGFTGKLPRAWFKTVDQLPMNVGDPHYDPLFPFGFGLYTEPTKALYSA 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1758 221 PANTHER BETA-D-GLUCOSIDE GLUCOHYDROLASE 1 220 - -
Ssu4g1758 221 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 1 220 - -
Ssu4g1758 221 Gene3D - 1 213 IPR036881 GO:0004553|GO:0005975
Ssu4g1758 221 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 1 211 IPR036881 GO:0004553|GO:0005975
Ssu4g1758 221 Pfam Glycosyl hydrolase family 3 C-terminal domain 1 210 IPR002772 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1758 Ssu-Chr4 31660319 31661083 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1758 1 214 Glycoside Hydrolase AT5G20940 74.299 3.34e-97 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1758 K05349 - gmx:100800077 407.527