Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1753 ATGTCTGTAGAACCTTCATCCAGCTCGGTGGTCGTCACCGATGGACAATCCAAGAAATCCAGGAAACCCAAAtATTCTAGATTCTCACAGCAAGAACTTCATGCCTGGCAACCAATTCTAACACCTAGTTGGgCCATTTCAATATTTACGGTTATAGGACTCATCTTCATTCCTGTTGGCTTTGCTTCATTATCTGCATCAGAGAGTGTGGTGGAGGTTCCATTCCGATATGATGACGAATGCATTCCGCCTGATTATAGAACTGATGCAGTGGCATATATTAAAGACGATAAGTCAAACAAAACTTGCACTAGGAAATTGAATgttaagaataaaatgaaGGCCCCTGTTTATGTCTATTATCAGCTTGATAACTTTTACCAAAACCATCGCCGATACGTTAAAAGTAGAGGTGATAAACAATTGAGGAGTAAAGCAGCTGAGAATGATGTAAGCTCATGTAGTCCCGAAGACTATACACCAAATGACTTGGGCCATCAACCAATTGTCCCTTGTGGCCTTATTGCATGGAGTCTCTTTAATGACACATACAGACTTTCAAGCAATAACAAGGATTTGATGATCAACAAAAAGAACATAGCATGGAAGAGTGACCAAAAGGCGAAATTCGGGTCTGATGTCTATCCAAAGAATTTTCAGGCTGGAGGTTTGATTGGGGGTGCTAAACTTAATGAGAGCATACCTTTGAGTGAACAAGAGGATCTCATTGTTTGGATGAGGACAGCAGCACTGCCTACTTTCAGAAAACTATATGGAAAGATTGAGACTGACATTGAAGTTAAAGATGAAGTAATGCTTGTAATAGAGAACAATTATAATACATATGAGTTTGGAGGCAGAAAGAGCCTGGTTCTTTCAACCACAAGCTGGGTTGGTGGAAGAAATCACTTTTTGGGGATGGCATATATTCTCATTGGCGCGGTTTCCTTGTTATTGGCTGTAGTTTTCCTACTTCTATATGTGAGGCAGCCAAGACCTCTTGGGGATCCATCATACTTGTCTTGGAACAGAAATCCCGGAAGTCTAGGATGA 1053 0.4036 MSVEPSSSSVVVTDGQSKKSRKPKYSRFSQQELHAWQPILTPSWAISIFTVIGLIFIPVGFASLSASESVVEVPFRYDDECIPPDYRTDAVAYIKDDKSNKTCTRKLNVKNKMKAPVYVYYQLDNFYQNHRRYVKSRGDKQLRSKAAENDVSSCSPEDYTPNDLGHQPIVPCGLIAWSLFNDTYRLSSNNKDLMINKKNIAWKSDQKAKFGSDVYPKNFQAGGLIGGAKLNESIPLSEQEDLIVWMRTAALPTFRKLYGKIETDIEVKDEVMLVIENNYNTYEFGGRKSLVLSTTSWVGGRNHFLGMAYILIGAVSLLLAVVFLLLYVRQPRPLGDPSYLSWNRNPGSLG 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1753 350 MobiDBLite consensus disorder prediction 1 24 - -
Ssu4g1753 350 MobiDBLite consensus disorder prediction 1 16 - -
Ssu4g1753 350 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 64 332 IPR005045 GO:0016020
Ssu4g1753 350 PANTHER CELL CYCLE CONTROL PROTEIN 50 17 347 IPR005045 GO:0016020
Ssu4g1753 350 PIRSF Lem3/Cdc50 3 345 IPR005045 GO:0016020
Ssu4g1753 350 PANTHER CDC50/LEM3 FAMILY-RELATED 17 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1753 Ssu-Chr4 31562145 31565284 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1753 - - gmx:100779539 622.854