Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1751 ATGGCTTCTGCACCTCGCTTGGCCTTCCTTGCCATTTCCATGGTTTTGCTTTCCTCTGTTGCTATGGCAACTGATTTCGTGGTGGGTGATGGGAAGGGCTGGGGTCTCGATTTTAACTACACAGAGTGGGCAAAGGACAAAGTTTTCCATGTTGGTGACAACCTTGATAACGAGGCATTTTCAAGCGGGAAGGACAGCATTACACTGAAAGCCGAAGGGAAGAAATGGTACATTTGTGGCAAAGCTAACCACTGCGCTGATCATCAAATGAAGCTCGTCATCAACGTTGAGGCCGTAGGTCCTGCATCTGTTCCTACTTCCTCTGCTTATTCTATGCTCTCATCTCTATCTGGAGTCCTCAAGGTTGCTGTTGCAGCCATCTTTGCAGTGAGAGACACGTGGCACTTCTCTAGAATCTTTGTTGACTCCTTTGCAATATGTATTGCCATGTGA 453 0.4724 MASAPRLAFLAISMVLLSSVAMATDFVVGDGKGWGLDFNYTEWAKDKVFHVGDNLDNEAFSSGKDSITLKAEGKKWYICGKANHCADHQMKLVINVEAVGPASVPTSSAYSMLSSLSGVLKVAVAAIFAVRDTWHFSRIFVDSFAICIAM 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1751 150 Gene3D - 22 57 IPR008972 -
Ssu4g1751 150 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 5 55 - -
Ssu4g1751 150 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 56 127 - -
Ssu4g1751 150 Pfam Plastocyanin-like domain 57 87 IPR003245 GO:0009055
Ssu4g1751 150 SUPERFAMILY Cupredoxins 22 96 IPR008972 -
Ssu4g1751 150 Gene3D - 58 107 IPR008972 -
Ssu4g1751 150 PANTHER BLUE COPPER PROTEIN 5 55 IPR039391 GO:0009055
Ssu4g1751 150 PANTHER BLUE COPPER PROTEIN 56 127 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1751 Ssu-Chr4 31536581 31537945 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1751 1 96 Miscellaneous Gene Families AT2G32300 28.689 7.20e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1751 - - gmx:100780078 180.644