Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1750 ATGGAGAAACAAACCGCGGAGAAATCACGTCGGGAACGAAGGAAAGAATCACGCTTGGCAAAGAATGCATCAAAACATCAATCCTGGCTCCTCCACCAGaAATCTCAAGCTATGAAAAAATGTGGCAATAATTCAGAGTTAGTAACTAAAAGCAAATCCGACACATCAGTTAGTCCTAGTGTCAAGGAAACACAAGTTGTGAAGTTAGAATCTTGTTCTAGGAAACATGAGTCAGCTGAAGAATACACAGTGTCAGAGGAAATTCGTGGTTCTGTtgcaaagaagatgaagaagggtTCTCACAAAAGTTCCAGGAAGAGCAGGGTGGAGATGATGGGCATGCGGGATGTTTCTATAGCCGCCGAAAGGGATCTAGAACTGGAAAGGAAGCTTTCCAAGAAGCTCAAGATGAAGGAAGGAAAATTGAGGGGAGTGGATGATGGGCTGAACATATTACTCGAAGGAATGTCGTCTGCTGTTGATTTCATGGGAGAAGGGGAGGTTCCTGGTACTGGTGAATTGCCTGCGAAGAGATCGAAGAAGAGCTCGTTGAGTAAGAAGGATAAATTGTCAAAGAAAAGAATCGAAGTGGAAGCAATGGATGATGTTTCAGCGCATGTAGAAACTCCTAATCAAGACGGAGAATCGGATGATGTTCCCGACAGTGTGCCTTCAAGGAAGAAgcataagaaaaggaaattgtCGGGTCAACAGCAGGAAGACATTGTGGAGGATGATGCTGTTGGCATGTCCAAGCCTGTGGAATCTTGTGGAGTGGAGGTGAAACTGGGGGATGCTCCTGCTGAAGTTCCGGAAAAGAAagccaaagaaaaatatatagcGCCTCACTTGAGAGCTCGTGCTGGCAATGAACCTGAAGAGCATACTCAAATTCGAAGACATGTGCGAGGCCTTCTTAACAGGCTTTCTGAATCTAATGTTGAGTCAGTTACTGGGGAATTGTCCTTGATCTTTCAGTCTGTTGCTCGTAGTGTTGCTTCACAGATCTTGACCGAGGAGATTTTAGCATCATGTTCTGGTGGCCCCCGTGGCAATCAACAGTATGCTGCTGTTTTTGCTGCATTTGTTGCTGGGATGGCAAGTTTGGTTGGTGTTGACTTCAGTGCAAAGTTTATGGCTTCCTTTGCAAAATGCTTTGAGGATGAGTACAATAAAGAAGACAATCTTTCCTTGCGGAATCTTACTCTTCTCTTATCCTATTTATGCATATTTGGAGTCTGTTCTAGTGATTTAATATATGACTTTCTAGTCATGCTGAGCAAGCGTTTAACTGAGATAGACGTCTCTATCATTTTGGCATTGTTACAATGTTGTGGGATGAAAATTAGGGCTGATGATCCAGCTGCAATGAAAAATTTCATTCTTAGTGTCCAGAATACATCAAATAAGCTGAAGGCTTCCTCTGGAGATGACAgcgaaaagaaaaatagtaaaagaATGGAGTTCATGCTTGAAATCATATGTGACATaaagaacaacaaaagaaagTCAAATGAGGACTCTGCACATCACACTCGGATTAAGAAGTGGTTACAGAAGtTAAGAGTTGATGACATTTTGATTAGAGGGCTTAAATGGAGCAAGTTACTTGATCCTGACAAGAATGGCCAATGGTGGTTGTCTGGAGATATGGCTTCTGCAACAGATAATGTTGAAGAAGTTGCCAACAGAATAGACAAAGATGTTCTTGAAACCCAACGAATGCTGCAGCTCGCTGCTGCTCAAAAGATGAACACTGATGCCAGAAGGGCAATCTTTTGCATAATAATGAGTGGGGAGGACTATATTGATGCATTTGAGAAGCTTCTAAGATTGGAATTACCAGGCAAGCAgGACAGAGATATCGTGCGGGTTCTTGTGGAGTGTTGCTTGCAAGAGAAAGTTTTTAACAAGTACTATACGGTGCTGGCTTCCAAGTTGTGCGAGCATGACAAAAATCACAAGTTCACTCTACAGTTTTGCCTGTGGGACCAGTTTAAGGAGCTGGAATCAATGCCGCTTATGAGGTCAATGCACCTGGCAAAATTTGTGGCTGAAATGGTTGCCTCTTTCACTCTCTCCCTTGCTGTTCTGAAGATGGTGGATCTAAACGATGTCACACTATTGACACCAAGAAGGATTATGCATTTCCGCATTCTGTTCGAAGCCATTTTTGAGTATCCTGAAAACTTGGTATGGAATATTTTCACACGTGCAGCAGTGACCCCTGAACTCGAAAGTCTTAGGCAAGGCCTTGAGTTTTTCATAAAGGAGTACGTTGTGAAAACCAATAAAGATCTAACTCAAAAATTTAAGTTGGCAAAAAGAGCCCTTGATAATGTGGAAGGAGTCTTGATGTGA 2361 0.41 MEKQTAEKSRRERRKESRLAKNASKHQSWLLHQKSQAMKKCGNNSELVTKSKSDTSVSPSVKETQVVKLESCSRKHESAEEYTVSEEIRGSVAKKMKKGSHKSSRKSRVEMMGMRDVSIAAERDLELERKLSKKLKMKEGKLRGVDDGLNILLEGMSSAVDFMGEGEVPGTGELPAKRSKKSSLSKKDKLSKKRIEVEAMDDVSAHVETPNQDGESDDVPDSVPSRKKHKKRKLSGQQQEDIVEDDAVGMSKPVESCGVEVKLGDAPAEVPEKKAKEKYIAPHLRARAGNEPEEHTQIRRHVRGLLNRLSESNVESVTGELSLIFQSVARSVASQILTEEILASCSGGPRGNQQYAAVFAAFVAGMASLVGVDFSAKFMASFAKCFEDEYNKEDNLSLRNLTLLLSYLCIFGVCSSDLIYDFLVMLSKRLTEIDVSIILALLQCCGMKIRADDPAAMKNFILSVQNTSNKLKASSGDDSEKKNSKRMEFMLEIICDIKNNKRKSNEDSAHHTRIKKWLQKLRVDDILIRGLKWSKLLDPDKNGQWWLSGDMASATDNVEEVANRIDKDVLETQRMLQLAAAQKMNTDARRAIFCIIMSGEDYIDAFEKLLRLELPGKQDRDIVRVLVECCLQEKVFNKYYTVLASKLCEHDKNHKFTLQFCLWDQFKELESMPLMRSMHLAKFVAEMVASFTLSLAVLKMVDLNDVTLLTPRRIMHFRILFEAIFEYPENLVWNIFTRAAVTPELESLRQGLEFFIKEYVVKTNKDLTQKFKLAKRALDNVEGVLM 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1750 786 Pfam MA3 domain 589 690 IPR003891 -
Ssu4g1750 786 SUPERFAMILY ARM repeat 292 503 IPR016024 -
Ssu4g1750 786 PANTHER CELL CYCLE CONTROL PROTEIN CWF22-RELATED 1 784 - -
Ssu4g1750 786 SMART ma3_7 588 694 IPR003891 -
Ssu4g1750 786 SMART if4_15 299 501 IPR003890 GO:0003723|GO:0005515
Ssu4g1750 786 MobiDBLite consensus disorder prediction 23 61 - -
Ssu4g1750 786 MobiDBLite consensus disorder prediction 80 94 - -
Ssu4g1750 786 MobiDBLite consensus disorder prediction 162 244 - -
Ssu4g1750 786 ProSiteProfiles MI domain profile. 587 703 IPR003891 -
Ssu4g1750 786 Pfam MIF4G domain 300 501 IPR003890 GO:0003723|GO:0005515
Ssu4g1750 786 Gene3D - 267 545 - -
Ssu4g1750 786 MobiDBLite consensus disorder prediction 1 22 - -
Ssu4g1750 786 PANTHER NUCLEOLAR MIF4G DOMAIN-CONTAINING PROTEIN 1 1 784 - -
Ssu4g1750 786 MobiDBLite consensus disorder prediction 189 203 - -
Ssu4g1750 786 MobiDBLite consensus disorder prediction 1 61 - -
Ssu4g1750 786 MobiDBLite consensus disorder prediction 80 115 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1750 K17583 - gmx:100780608 1282.7