Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1743 ATGGCGATGAAACTCAACTATCTGTCTTCCATTGCCGAGGACGTCATCAAGAGATGCGCACAGAAACTTGACACTTCGGTAGAGAGATTGGTGGAAGATTTTGAAGGAGGATGGAACCCTGATATGGGAAACTAttgcaaaaaattaattgaattttgcaGTGGGAAGGTTCTGAGTGAAATGTGCCACAACATAGAGGGAAACATCAACGATGCCTCGTTTAGCAGGCTGACATATGACATGATGCTTGCCTGGGAGAGACATAGCTACTACGATGAAGGAGAGCCAACGGAGCCTGTagcaaaggagaaagaagaaaggaagatgaCTGTGAATGCCACCCAAGAACAGGATGATATCCCTCTTTTTTATTCAGACATCATGCCCCTCCTTGTGAATAATGAGCCCAATGTTGGAGAAGACGCATTTGTATGGTTGGGATCAATAGTACCACTAGTTGCAGATGTAGCAAATGGAAGGTTTACTTTTGAAACTCTAACAGCACCGACAGGTTTCCGACTACATTTTCCGGCATACGACATGTTCTTAAAAGAAATGGACAAGTGCAAACAACTTTTGCAGAAACAGGCAACACCAAATGGGGTGGAATTGGCTGAGGatgaatatatattacatgTAGATGGAACAGCCAGCACTCAGAGAGTAGTTCGCCACATTGGATCAACAAGTTGGCCTGGTAGGCTTACACTGACCAATTACTCTCTTTACTTTGAGGCTTCCGGAGTAATTAAGTATCAAGATGCTCTCAAAATAGACCTCTCAAAGAATGATGAGCAGAGTGTTAAACCTGCTGCCACAGGTCCATGGGGAGCTCAACTTTATGACAAAGCCATAGCCTATGATTCAACTGATTTATCAGAGACAGTTGGATTGGAGTTCCCAGAGCTTACAAGTTCCACGAGACGTGATCATTGGCTTGCACTAGTAAGGGAAATAATGTTTCTCCACCAGTTTTTATCAAAGTACCAGATAAAATGCCCAATACAAACATGGGAGATGCATGCAAGGACAATATTGGGAATCATAAGGCTGCATGCAGCAAGAGAAATGCTAAGAATATCACCTCCTGTCCcaacaaaattcttaatattttccttatatAACGAGATACCAAAGGGAGATTATGTGCTCGAACAGCTCGCAGATAGCCTCAAAAAGGGCAATAATGGACAGTCATGTAGTGCAAGTTCTATCCTTAGGCGTATGAACATCTCTAATAATGTAGTTTCTGatataataatagataaggCTACTCAAGCAGAGGGAAGTGTTAATGTTGTAGATGATAGTCCCTCATTGGAGACTGCCATCAAACAATCTAGGgaggaagaaaaggaaattcTCATTGCGAAAGCTACCACTGAAGAATTAAAGGAGGAAGGAGTCACTGACAGTGTCTTGGTTCTAACGGAACTACTAAAGCCCCTTAAAAATGTGGCCCCTTGGTTTCAAGAAATCTTCTCATGGGAAAGGCCAATAATTACTCTTGCTGTTCTTGCTACCTCCCTGATGATCACCTATATGGAATGGGTTGGCAAGGCATTTGCAGCTTTCTTGATTTGGGCAATAATAAAGATGCTTGAGGCAAGACAAAATAAGATTCATGAGAAATGCATTGAGATAGTAATTAGTAGATCCAGTGAGGCTTCTGATCAGTCTACGATGGAGAGCATTGTCTCAGCCCAGCATGGATTGTACACTGTTCATGAGATGATGCAGATAGCAAGCATAGCAATGCTAAAGATATGGTCAATACTTATTTCAAAGGCTGATAAGCATGCAAATTTAGTGATGGTGGCAATGAGTGGGTTGGCGATCCTATTGGCAGTAATTCCATTCAAATTCTTCCTTATGGGTCTCATTCTCCAAAGCTTCACTATTGCATCAGGAAAGTCCTCTGGAACAGGGAATAGACGGTTGAGGGAATGGTGGGATTCAATACCAATCGTTCCTATTCGTGTAGTAGACGACGTTCCTAACACCGATGATGCTAAATAG 2019 0.4022 MAMKLNYLSSIAEDVIKRCAQKLDTSVERLVEDFEGGWNPDMGNYCKKLIEFCSGKVLSEMCHNIEGNINDASFSRLTYDMMLAWERHSYYDEGEPTEPVAKEKEERKMTVNATQEQDDIPLFYSDIMPLLVNNEPNVGEDAFVWLGSIVPLVADVANGRFTFETLTAPTGFRLHFPAYDMFLKEMDKCKQLLQKQATPNGVELAEDEYILHVDGTASTQRVVRHIGSTSWPGRLTLTNYSLYFEASGVIKYQDALKIDLSKNDEQSVKPAATGPWGAQLYDKAIAYDSTDLSETVGLEFPELTSSTRRDHWLALVREIMFLHQFLSKYQIKCPIQTWEMHARTILGIIRLHAAREMLRISPPVPTKFLIFSLYNEIPKGDYVLEQLADSLKKGNNGQSCSASSILRRMNISNNVVSDIIIDKATQAEGSVNVVDDSPSLETAIKQSREEEKEILIAKATTEELKEEGVTDSVLVLTELLKPLKNVAPWFQEIFSWERPIITLAVLATSLMITYMEWVGKAFAAFLIWAIIKMLEARQNKIHEKCIEIVISRSSEASDQSTMESIVSAQHGLYTVHEMMQIASIAMLKIWSILISKADKHANLVMVAMSGLAILLAVIPFKFFLMGLILQSFTIASGKSSGTGNRRLREWWDSIPIVPIRVVDDVPNTDDAK 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1743 672 PANTHER HEAT-INDUCIBLE TRANSCRIPTION REPRESSOR (DUF639)-RELATED 3 664 - -
Ssu4g1743 672 Coils Coil 447 467 - -
Ssu4g1743 672 Pfam Plant protein of unknown function (DUF639) 439 664 IPR006927 -
Ssu4g1743 672 PANTHER ARGH (DUF639) 3 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1743 Ssu-Chr4 31406611 31413169 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1743 - - gmx:100783299 1177.93