Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1736 ATGGAGGCAGGTTTGGTGCAGCGGGGTAAAGAGAGAGTTGGACATGTTCATAAGGTTGGTTATGTGAGAAGGGTCATTGCCAAGAAGAGAAAGCAGGTTTATCGCAGGGTTAGGAGGCCGGAGCTGAGTGTTTCAAAGACACTTCAGCAGCTATTTGATTCATGCAGAGAAACATTCAAAGGCCCTGGCACCGTTCCTTCACCACAAGATGTTCAGACACTGCGCCACATACTTGATAACATGAAGCCAGAAGATGTGGGGCTAAGTAGAGATCTGCCGTTCTTCAAGCCTGGAAATATTGTCAAAGAGAACCAAAGGGTCACGTATGCAACCGTGTACAAGTGCGACAATTTCTCACTATGCATCTTTTTTATACCTGAAGGAGGAGTCATTCCTCTCCATAACCACCCGGGCATGACTGTTTTAAGCAAGCTTCTATTAGGACTAATGCACATCAAGTCCTACGACTGGGTTGATCCTGAGGCCTCTGACAACTTGTTGCAACAACCATCTAAATTGAAATTGGCAAAGTTAAAAACTGATAAGGTGTTCACAGCACCATGTGACGCTTCAGTGCTGTATCCAACAACAGGAGGCAACATCCATGAATTCACAGCCATGACTCCATGTGCTGTGCTTGATGTCATTGGTCCTCCTTATTCCAAAGAAGATGGCCGGGACTGTTCCTACTACAGAGATCACCCTTTTGCTTCTTTTCCCAACGAAAGGATTGGTGACGTGAAAGAGGAAAATGATAGTTACGCGTGGTTGGAAGAAATTGAGATGCCAGAGAACTCTGAAATGGATGGCATTGAGTATCTGGGTCCTCCCGTTTACTAA 840 0.4548 MEAGLVQRGKERVGHVHKVGYVRRVIAKKRKQVYRRVRRPELSVSKTLQQLFDSCRETFKGPGTVPSPQDVQTLRHILDNMKPEDVGLSRDLPFFKPGNIVKENQRVTYATVYKCDNFSLCIFFIPEGGVIPLHNHPGMTVLSKLLLGLMHIKSYDWVDPEASDNLLQQPSKLKLAKLKTDKVFTAPCDASVLYPTTGGNIHEFTAMTPCAVLDVIGPPYSKEDGRDCSYYRDHPFASFPNERIGDVKEENDSYAWLEEIEMPENSEMDGIEYLGPPVY 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1736 279 PANTHER UNCHARACTERIZED 32 278 IPR012864 GO:0016702
Ssu4g1736 279 SUPERFAMILY RmlC-like cupins 45 233 IPR011051 -
Ssu4g1736 279 Pfam PCO_ADO 77 278 IPR012864 GO:0016702
Ssu4g1736 279 PANTHER CYSTEINE OXYGENASE/2-AMINOETHANETHIOL DIOXYGENASE, RMLC-LIKE JELLY ROLL FOLD PROTEIN-RELATED 32 278 - -
Ssu4g1736 279 CDD cupin_ADO 116 221 - -
Ssu4g1736 279 Gene3D Jelly Rolls 38 243 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1736 Ssu-Chr4 30938802 30941067 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1736 K23953 - gmx:100805411 498.819