Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1729 ATGGGGACTCTGACGAGTTGCGGTTTCAGGCCTCTGAACTCGGAGTTCCACTCCAACCCGGTTCGCCGCGCCTTCAGGGAGCGGATTCAGTGCCACCAACTCACTCGATTGAGAGGCACCTCTTGTTTCTTCTCACGCGCGCGTGTGCCCAAATGGGGCAAGTCGAGGCACGCCAATTTTAATAGCCTTAGGTGTTTTGCTACGAATAACAACGACAATGACAAGGACATCGTTGGTGCTGGAGAGGAAAGTGGTGGAGACGATTCTAAATCTAACGTCACGACAACGATGCCTGAAGACGAGAGAGGGTTCACTTCGGAGAAATCAACGCCTCCCTCTACTTCTCACAGGTCGTTGTCGTCGCTTGGACCGGCGTACAACAATTTTCAAGTTGATTCTTTCAAACTTATTGAGCTCCTTGGGCCTGAGAAGGTTGATCCCGCTGATGTAAAGCTGATTAAGGATAAGCTTTTTGGGTATTCGACCTTCTGGGTGACGAAAGAGGAGCCTTTTGGAGACTTGGGAGAAGGGATTCTTTTCCTTGGGAATTTAAGGGGGAAGAGAGAGGATGTTTTTGCCAAACTCCAGAATCAGCTAGTTGAGGTCACAGGTGATAAGTACAACCTTTTCATGGTGGAGGAACCCAATTCGGACAGTCCTGACCCGCGCGGTGGGCCGCGTGTTAGCTTTGGTTTGTTGAGGAAGGAGGTTTCTGAGCCGGGGCCGACGACGCTTTGGCAATATGTCATTGCATTGTTGTTGTTTCTCCTAAGTATTGTTTCATCAGTGGAGCTAGGAATTGCATCTCAGATCGACAGACTTCCCCCAGAAGTTGTGAAATACTTCACAGATCCAGATGCTGTTGAAGCTCCAGATATGGATCTGCTATTTCCATTTGTCGAGTCAGCTTTGCCTTTAGCATATGGTGTCTTGGGGGTTCTTCTGTTTCATGAAGTTGGACACTTTCTTGCAGCATTTCCTAAACAAGTAAAATTAAGCATTCCGTTCTTCATTCCAAACATCACACTAGGCAGCTTTGGTGCTATTACTCAGTTTAAATCCATCCTTCCTGATAGAAGTACAAAAGTAGACATATCACTTGCTGGTCCCTTTGCTGGTGCTGTATTATCATTTTCGATGTTTGCTGTTGGCCTTCTTCTCTCATCGAATCCAGATACAACAGGAGATTTGGTGCAAGTTCCTAGCTTGTTGTTTCAAGGTTCCTTGCTTCTTGGATTAATCAGTAGAGCAACTCTTGGTTATGCAGCAATGCATGCTGCAACAGTTTCAATTCACCCTCTTGTGATTGCAGGCTGGTGTGGCCTAACCATACAAGCTTTTAACATGCTTCCAGTGGGGTGCCTTGATGGCGGAAGAGCAGTGCAGGGTGCTTTTGGAAAAAGTGCACTAGTTGGCTTTGGTTTAACCACTTATACATTGCTTGGATTAGGAGTGCTTGGTGGACCTCTTTCACTTCCTTGGGGACTTTATGTTTTGTTATGTCAGAGGACACCGGAGAAACCTTGCTTAAATGATGTGACAGAGGTTGGAACATGGAAAAAGGCACTTGTGGCCGTTGCTATTTTTCTTGTTGTCTTGACTCTTGTTCCTGTTGGGGATGAGCTTGCAGAGGAACTGGGTATAGGTCTTGTAACTGCTTTTTGA 1665 0.4649 MGTLTSCGFRPLNSEFHSNPVRRAFRERIQCHQLTRLRGTSCFFSRARVPKWGKSRHANFNSLRCFATNNNDNDKDIVGAGEESGGDDSKSNVTTTMPEDERGFTSEKSTPPSTSHRSLSSLGPAYNNFQVDSFKLIELLGPEKVDPADVKLIKDKLFGYSTFWVTKEEPFGDLGEGILFLGNLRGKREDVFAKLQNQLVEVTGDKYNLFMVEEPNSDSPDPRGGPRVSFGLLRKEVSEPGPTTLWQYVIALLLFLLSIVSSVELGIASQIDRLPPEVVKYFTDPDAVEAPDMDLLFPFVESALPLAYGVLGVLLFHEVGHFLAAFPKQVKLSIPFFIPNITLGSFGAITQFKSILPDRSTKVDISLAGPFAGAVLSFSMFAVGLLLSSNPDTTGDLVQVPSLLFQGSLLLGLISRATLGYAAMHAATVSIHPLVIAGWCGLTIQAFNMLPVGCLDGGRAVQGAFGKSALVGFGLTTYTLLGLGVLGGPLSLPWGLYVLLCQRTPEKPCLNDVTEVGTWKKALVAVAIFLVVLTLVPVGDELAEELGIGLVTAF 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1729 554 CDD S2P-M50_like_2 252 475 - -
Ssu4g1729 554 PANTHER ZINC METALLOPROTEASE EGY1 5 548 IPR044838 -
Ssu4g1729 554 PANTHER ZINC METALLOPROTEASE EGY1, CHLOROPLASTIC-RELATED 5 548 - -
Ssu4g1729 554 MobiDBLite consensus disorder prediction 107 122 - -
Ssu4g1729 554 MobiDBLite consensus disorder prediction 76 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1729 Ssu-Chr4 30779174 30789735 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1729 K25380 - gmx:100808073 967.607