Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1728 ATGGGATCGTTCTCCTcttcccttcttcttcttcttttccttttcttcttctcttcctcacTCTCCAATCCCCATAACCCTCTCACACTCAAAGGTGTTGATATTGAAAGGCCGGTTTTGGAGGTCTCTCCTTCCGTACTTCCCGGGCCTTCGGCGTCTCAAGGTGTTAAAGACACTTTGCGATGTGATCGCGTTCGAATTTCGGGCATCTCGAGACTGAAACTTGGGAGCTACGCTAATTCGTTCCATGTTACTTTGGCCCCGTCTGCTTCGATCCCGGAGAAGTTGCACAGCAAAATTCAGGTTTGTTTCCACAGGAATGATACACTTGGATGGTGTCAATGTGAAAAGGATGAGTGGAGAAGTGTGCAGAAGGGGGTCTGGAATGCTGTTATGTCACCTTATGAAACTAGATATGTTGATGCGAGGATCAATGGAGAAATATCGGGTTCTGTTACAGTTGCTCTTGAAGAAGATTTCCAGCAATGGCGCCTCATTTGTCTTGCAGTGGGATTGATAATGCTGTTGTTGGCTCCAATTGTTAGCAGTTGGGTTCCGTTTTATTATAGCACTTCAATGGCTATAGGGATCTTTCTTGTCATTATAATCCTTCTTTTTCAGgGCATGAAATTAATGCCAACTGGaagaaaaaatatcttttacctTACCATATATGGATCAGTGGTTGGAGCTGGGTCATTCCTTTTGCACCAACTCTCTTTAatcttaaattcaatttttcagAGTCTTGGGATGAGTGAAGAGATGCACAATCCAGTTGCTGTTTTTGTAATACTGGGCATCATCTTGGCTGGAGCTGCTTTAGGCTACTGGATTGTCAGGAGGTTTGTTATTTCAAAAGAAGACGGTAGTGTGGATGCTGGAGTTGCTCAGTTTGTGAAATGGGCAATGCGCATCATTGGAACCGCTTTCATTTTGCAGAGCACTCTTGATCCTCTTCTAGCAATTGGAGCGTTGATCTCTTGTGGAGCTGTTTGCAAACTTATTTCTGCCATAAAATGGCTTCATGGATGGTATGAAACTTCAGGGAATGATGACTATTCGCTGCAATGGGTGAGAGGAACACGTGGTCGTGCGGAATTCCTTAGCAAGTCAACACCTAGAGGAAAACATTGGAGTAGCCCTAAAGGAAAATTGTGGAATAGCCAAGGTCAACATTGGAGTAGCCCTAAAGGAAAATTGTGGAACAGCCCTAAAAGTTCGGCATGGTCTGACTCTCCTGTGAGAGGTGTTGTATCACCATCTTCTGGGATTTCGTCACAATCTTCTGGGACTCAAATGGGACAGGATTATTATTCAACCTTCCACAAGACCCGCAACAGAAAGAAGTTCACTAAGCAAGAGTGGGATGAGTTTACAAGAGAATCCACTAAGCAGGCTCTAGCAGAATGGGCAGCTTCTCCAGAATTCACTGATTGGATCGTTGAGCATGCAGACCGGATAAAAGTCCTTCCAAGTGACAGTTCAGACGAGACAATGGGAAGTGAATCGGATTCCACGGATCTAGGAAGTGGAAGTGGATTTCGGCTTTTTAATTGGCAGTGA 1566 0.4246 MGSFSSSLLLLLFLFFFSSSLSNPHNPLTLKGVDIERPVLEVSPSVLPGPSASQGVKDTLRCDRVRISGISRLKLGSYANSFHVTLAPSASIPEKLHSKIQVCFHRNDTLGWCQCEKDEWRSVQKGVWNAVMSPYETRYVDARINGEISGSVTVALEEDFQQWRLICLAVGLIMLLLAPIVSSWVPFYYSTSMAIGIFLVIIILLFQGMKLMPTGRKNIFYLTIYGSVVGAGSFLLHQLSLILNSIFQSLGMSEEMHNPVAVFVILGIILAGAALGYWIVRRFVISKEDGSVDAGVAQFVKWAMRIIGTAFILQSTLDPLLAIGALISCGAVCKLISAIKWLHGWYETSGNDDYSLQWVRGTRGRAEFLSKSTPRGKHWSSPKGKLWNSQGQHWSSPKGKLWNSPKSSAWSDSPVRGVVSPSSGISSQSSGTQMGQDYYSTFHKTRNRKKFTKQEWDEFTRESTKQALAEWAASPEFTDWIVEHADRIKVLPSDSSDETMGSESDSTDLGSGSGFRLFNWQ 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1728 521 MobiDBLite consensus disorder prediction 370 433 - -
Ssu4g1728 521 MobiDBLite consensus disorder prediction 383 433 - -
Ssu4g1728 521 PANTHER TRANSMEMBRANE PROTEIN (DUF2215) 7 509 - -
Ssu4g1728 521 PANTHER EXPRESSED PROTEIN 7 509 - -
Ssu4g1728 521 MobiDBLite consensus disorder prediction 495 521 - -
Ssu4g1728 521 Pfam NEMP family 153 444 IPR019358 -
Ssu4g1728 521 MobiDBLite consensus disorder prediction 492 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1728 Ssu-Chr4 30759162 30764576 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1728 - - gmx:100808605 841.262