Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1725 ATGATTGCGAGGGATGAAAATTATGGTGTTGGTTTTGGGGGAGGAGGAAGATGGTTAAGGGGGTTTGGAAGCTTGATTAGGAGGAAGCAAGTTGATTCTGTTCATGTCAGGAGACATTCTCAATTGGCTAGGAAGTTATCTGCGGTTGATCTCGTTGGAATTGGGGTTGGAGCTACCATAGGAGCTGGAGTGTATATTCTCATTGGAACAGTTGCTAGAGAGCAAGCAGGACCAGCTCTTGTTATATCACTTCTCATTGCAGGAATAGCTGCTGGACTGTCGGCTTTTTGCTATGCAGAGCTTGCATGCCGGTGCCCGTCTGCAGGGAGTGCTTAtcattatacatacatatgcatTGGAGAAGGGGTTGCTTGGCTGGTCGGTTGGTCTCTGATTCTAGAATATACAATTGGTGCTTCAGCTGTTGCTCGTGGCATAACCCCAAATCTGGCCTTGTTTTTTGGTGGAGAGGACAACCTACCCTTATTTTTGGCTCGACATACCTTACCAGGTCTTGGAATTGTGGTTGATCCCTGTGCAGCtgcattaatttttcttgttaccCTACTCCTGTGCCTTGGAATCAAGGAGAGTTCAACAGCACAATCCATTGTGACAACAGTAAATGTCTGTGTCATGCTTTTCATAATTTTAGCTGGTGGATATCGAGGTTTCAAGTCTGGATGGGTTGGATATGAACTCTCCAGCGGGTATTTTCCTTATGGAGTGAATGGGATGTTTGCTGGGTCTGCAATAGTTTTCTTTTCATACATTGGTTTTGATTCAGTGACCAGCACAGCTGAGGAGGTAAAAAATCCTCAACGGGACTTGCCAATTGGCATATCTACTGCGTTGACTATATGTTGCATTCTGTATATGCTTGTAGCAGCAGTTATTGTTGGCTTAGTACCATTTTATGAGTTGAACCCTGATACCCCAATCTCCTCAGCATTTTCTAGCCATGGGATGGAATGGGCAGTGTATATAATAACAACTGGAGCTGTCACTGCTCTTTTTGCCAGTTTGTTGGGTTCAGTTCTTCCTCAGCCACGTGTCTTTATGGCAATGGCTAGGGATGGTTTATTGCCTCCTTTCTTCTCAGACATCCATAAAGGCACACAGATTCCTTTGAAAAGCACTATTGTCACTGGTGTCTTTGCAGCTACTCTCGCATTCTTTATGGATGTTTCCCAATTAGCAGGAATGGTTAGTGTGGGAACATTGCTTGCATTTACCACCGTTGCAGTTTCAGTTTTGATAATCAAATATGTTCCACCTGATGAGGAACCCATTCCGTCTTCACTTCTAACATCTGTTGATCCATTGTTGAGGCATTCTGGTGGTGATATTGGGGAAGATAGGGCCATAAGTCCTGTAGATCCTGCTAGTTATTGTGAGAATAGTCACCTACATGACAAGTCAGAGGCTCTGCTTGGGCATCCTTTAATCATAAAAGAAGAGACCAAAGATGAAGTGAATGAGAAAGCTAGGCGGAAACTTGCTGCATGGACCATAGCCCTTCTATGTATAGGGATTCTCATAGTTACCAGTGCAGCTTCAGCTGACTGGTGTCCCAGGATTTTGCGCTTTTCAATTTGTGGAATCGGTGGTATTCTTCTTTTGTGCAGTATAATTGTACTGGCCTACATAAAACAAGATGATACAAGGCACAGCTTTGGACACTCGGGAGGTTTTGCTTGCCCATTTGTTCCGTTCTTACCTGCTGCATGTATTCTTATAAACACCTACTTACTGATTGATCTTGGATTTTCTACATGGCTACGAGTTTCGGTATGGTTGTTGATGGGAGTACTTGTATACTTGTTCTATGGCCGCACTCACAGCTCACTGTTACATGCAATCTATGTTCCCTCAGCATATGCTGATGAAATCCATCGTTCTCAAGCAATTCATCTTGCCTAA 1923 0.4306 MIARDENYGVGFGGGGRWLRGFGSLIRRKQVDSVHVRRHSQLARKLSAVDLVGIGVGATIGAGVYILIGTVAREQAGPALVISLLIAGIAAGLSAFCYAELACRCPSAGSAYHYTYICIGEGVAWLVGWSLILEYTIGASAVARGITPNLALFFGGEDNLPLFLARHTLPGLGIVVDPCAAALIFLVTLLLCLGIKESSTAQSIVTTVNVCVMLFIILAGGYRGFKSGWVGYELSSGYFPYGVNGMFAGSAIVFFSYIGFDSVTSTAEEVKNPQRDLPIGISTALTICCILYMLVAAVIVGLVPFYELNPDTPISSAFSSHGMEWAVYIITTGAVTALFASLLGSVLPQPRVFMAMARDGLLPPFFSDIHKGTQIPLKSTIVTGVFAATLAFFMDVSQLAGMVSVGTLLAFTTVAVSVLIIKYVPPDEEPIPSSLLTSVDPLLRHSGGDIGEDRAISPVDPASYCENSHLHDKSEALLGHPLIIKEETKDEVNEKARRKLAAWTIALLCIGILIVTSAASADWCPRILRFSICGIGGILLLCSIIVLAYIKQDDTRHSFGHSGGFACPFVPFLPAACILINTYLLIDLGFSTWLRVSVWLLMGVLVYLFYGRTHSSLLHAIYVPSAYADEIHRSQAIHLA 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1725 640 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 19 633 - -
Ssu4g1725 640 PIRSF AA_transporter 24 431 - -
Ssu4g1725 640 PIRSF AA_transporter 490 624 - -
Ssu4g1725 640 PANTHER CATIONIC AMINO ACID TRANSPORTER 4, VACUOLAR 19 633 - -
Ssu4g1725 640 Pfam C-terminus of AA_permease 565 615 IPR029485 -
Ssu4g1725 640 Gene3D Amino acid/polyamine transporter I 41 440 - -
Ssu4g1725 640 Pfam Amino acid permease 46 430 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1725 Ssu-Chr4 30600567 30607661 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1725 22 640 Organic Solute Cotransporters AT3G03720 64.791 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1725 K13863 - gmx:100816704 1146.72