Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1724 ATGGGTGTTTCGGTTGATTCACAATCACAAAAGGGTTCATGGGGTTCCTTGAAGTTCTTAACTAGGAGGAAGCAGGTTGATTCTCCACGTAGGAACACTAAGCCTCTTCTTGCCAAGGAGTTAACTGTTCCTCATCTCATTGCAGTTGGGGTTGGTTCAACAATTGGTGCTGGAGTGTATGTTCTGGTGGGAGCGGTTGCACGAGAGCATGCTGGACCCGCTTTGGCCATTTCTTTTCTGATTGCTGGATTAGCAGCTGCTCTTTCTGCCTTTTGCTATGCAGAGTTGGCTAGTCGCTGCCCTTCTGCTGGGAGTGCATATCACTATTCATACATTTGTCTCGGGGAAGGtGTTGCTTGGTTGATTGGCTGGGCCCTGATATTGGAATATACAATTGGTAGTGCTGCTGTTGCTCGTGGCATAACTCCCAATCTGGCTGCACTTTTTGGTGGTGCGGACAATTTACCCATATTTTTAGCACGCCAGCGTATTCCTGGAGTAGATATTGTTATGGACCCATGTGCAGCAATCTTGGTATTACTTGTTACCGGACTCTTATGTTTGGGGATTAAGGAGAGTACAGTGGTACAGGGCATAGTGACAACAGTGAATGTATGTGCATTGCTTTTTGTTGTAGCAGCTGGGGGTTACGTGGGATTCAAGTCTGGATGGGTTGGATATGAACTTCCTATGGGGTTTTTCCCCTTTGGGGTTGATGGGATGCTGGCTGGTTCTGCAACAGTATTCTTTGCATATATAGGCTTTGATGCAGTTGCCAGCACTGCTGAAGAGGTAAAAAATCCTCAACGAGATTTACCCCTTGGTATTGCTGGTGCACTGTTTCTTTGCTGTGGGATATATATGATGGTGTCCATTGTTGTAGTTGGTTTAGTACCTTATTATGCAATTGATCCGGATACCCCAATATCATCTGCATTTGCTGAACAAGGGATGCAATGGGCAGCTTACATTATAAATGCTGGTGCTTTCACAGCTCTCTGCTCAGCATTGTTGGGTGGGATACTTCCCCAGCCACGAATTTTGATGTCTATGGCAAGGGATGGACTGCTGCCACCTTTTTTTTCTGATATAAGTAAGCAGACTCAGGTTCCTGTTAAGGGCACAATAGCTACTGGTGTTGTGGCTGCAATCTTGGCATTTTCTATGGAAGTCTCTCAACTGGCAGGAATGGTTAGTGTGGGTACGCTTTTAGCATTCACCGTGGTGGCAATGTCTGTGTTGATCCTGAGATATATCCCTCCAGATGAAGTCCCATTGCCTCCATCTCTCCAGGATTCAATTGCTTCAGTGTTAAAGAGGTATAGTTTGAGCAGTGCAGAGACAATTGTGGAATATGAAGATGCAAATGTTGATAGTTCTGAGGACAGAAAACCTTTAATTGTCAAGAAGGATGTTTCAATTGATTTTTCTAAACATCTTGCTGTAGGCAACTATCTAAATGAAGGTAACAGGCGAAGAGTTGTTGGGTGGATCATAGCATTCATACACTTAGGGGCGTTTGTCCTAGCATATGCAGCTTCAGATTTAACTCTTCTTAGTTCTGTTCGCTTTGCATTATGTGGAGTTGGCGGTGCTCTTCTTTTGTGTGGTCTTGTTTTCCTAACCTATATAGATCAAGATGATGCAAGGCACGACTTTGGGCACTCTGGAGgtttCATTTGTCCATTTGTGCCACTGCTTCCCATAGCTTGCATTCTCATCAATTCCTACTTACTTGTTAATCTTGGATATGGTACATGGTTGCGTGTTTCTCTATGGCTGGCAACAGGACTACTAGTTTATGTGTTCTATGGCCGAACCCATAGCTCTCTAAAAGATGCAATTTATGTGCCAGCAAAGCAAGTGGATGAAATTTACCAAACATACAGAAGCTGTCATGCTTAA 1905 0.4409 MGVSVDSQSQKGSWGSLKFLTRRKQVDSPRRNTKPLLAKELTVPHLIAVGVGSTIGAGVYVLVGAVAREHAGPALAISFLIAGLAAALSAFCYAELASRCPSAGSAYHYSYICLGEGVAWLIGWALILEYTIGSAAVARGITPNLAALFGGADNLPIFLARQRIPGVDIVMDPCAAILVLLVTGLLCLGIKESTVVQGIVTTVNVCALLFVVAAGGYVGFKSGWVGYELPMGFFPFGVDGMLAGSATVFFAYIGFDAVASTAEEVKNPQRDLPLGIAGALFLCCGIYMMVSIVVVGLVPYYAIDPDTPISSAFAEQGMQWAAYIINAGAFTALCSALLGGILPQPRILMSMARDGLLPPFFSDISKQTQVPVKGTIATGVVAAILAFSMEVSQLAGMVSVGTLLAFTVVAMSVLILRYIPPDEVPLPPSLQDSIASVLKRYSLSSAETIVEYEDANVDSSEDRKPLIVKKDVSIDFSKHLAVGNYLNEGNRRRVVGWIIAFIHLGAFVLAYAASDLTLLSSVRFALCGVGGALLLCGLVFLTYIDQDDARHDFGHSGGFICPFVPLLPIACILINSYLLVNLGYGTWLRVSLWLATGLLVYVFYGRTHSSLKDAIYVPAKQVDEIYQTYRSCHA 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1724 634 Gene3D Amino acid/polyamine transporter I 37 438 - -
Ssu4g1724 634 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 11 625 - -
Ssu4g1724 634 PIRSF AA_transporter 476 623 - -
Ssu4g1724 634 PIRSF AA_transporter 18 426 - -
Ssu4g1724 634 Pfam C-terminus of AA_permease 559 609 IPR029485 -
Ssu4g1724 634 Pfam Amino acid permease 45 423 IPR002293 GO:0016020|GO:0022857|GO:0055085
Ssu4g1724 634 PANTHER PROTEIN, PUTATIVE-RELATED 11 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1724 Ssu-Chr4 30576528 30584475 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1724 15 628 Organic Solute Cotransporters AT5G36940 66.345 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1724 K13863 - gmx:100784895 1120.15