Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1716 ATGGATTCAGCTTCTGTGCAAATAGCGAGGTCTAAATTTGTTCTTTGCCCGAATGCTTCAGCGGCCAGGGCCGCGAGTCCCAAGAAGAGTGCTATCAATTTCGGGTCCAATTTCAAAGGAAGATGTGTCACCAAAATCCATGCCGTTTCCCCTAATGACTCTGTCCCTAGCTGCTCTTCGCTTCCGTCTGTGTCAAGTTTAAAGGCAGATGAGAACAAAGGCAGAAGTAATCTTGAATCTCTGTTTTGTTATGATAAGGCTATTCCAGAAGAAATAATTGAGAAGCCTGTTGGGTTATCTTTGGAAGAGAAAGCTATTGGTAACAATACCCGATGCACTGATTGCCAGGCCAAAGGTGCTGTGCTTTGTGTCACTTGTGCTGGTTCCGGTCTATACGTTGATTCCATATTGGAAAGCCAGGGCATAATTGTTAAAGTTCGTTGCTTAGGTTGCGGGGGAACAGGTAATATAATGTGTGCAGAATGTGGGGGACGAGGTCATCTGGGACCCAAATGA 516 0.4535 MDSASVQIARSKFVLCPNASAARAASPKKSAINFGSNFKGRCVTKIHAVSPNDSVPSCSSLPSVSSLKADENKGRSNLESLFCYDKAIPEEIIEKPVGLSLEEKAIGNNTRCTDCQAKGAVLCVTCAGSGLYVDSILESQGIIVKVRCLGCGGTGNIMCAECGGRGHLGPK 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1716 171 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 106 168 IPR036410 -
Ssu4g1716 171 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 41 166 - -
Ssu4g1716 171 PANTHER DNAJ/HSP40 CYSTEINE-RICH DOMAIN SUPERFAMILY PROTEIN 41 166 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1716 - - gmx:100306113 286.574