Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1714 ATGGGGCTCAAAATCTTCATGGTTTCCTTCATGGTAACCTCAATCttgttctttcttctcttcatccCCACAAGACTGACCATACAAATCTCCAGCCTGAGGCCAGCTGTGAACTACTTCAGTGTCCCCAAAAGCAGCAAGGCTTATCCAGTTGCTTTTGCCTACTTGATCTCTGCATCAAAAGGAGATGGTGGGAAGCTCAAAAGGTTGCTGAGGGTGCTGTATCATCCAGGGAACTACTATCTGATTCATGTGGATTATGGGGCTCCAGAGGCTGAACATAGGGATATGGCAGAATATGTGGCTAGTGATCCTGTTTATGGTCAAGTGGGGAATGTTTGGGTTGTGGGGAAGCCTAATTTGGTCACATATAGAGGACCAACCATGCTTGCTACCACTCTCCATGCCATGGCAATGCTTCTCAGGACCTGCCAATGGGATTGGTTTATTAATCTTAGTGCATCTGATTATCCCTTAGTTACACAAGATGATCTGATCCAAGCGTTTTCTGAGTTGCCAAGGGGTATCAATTTCATACAACATAGCAGTCAATTGGGTTGGAAATTGAATAAGAGAGGGAAGCCAATAATCATAGATCCGGGGCTTTATAGCCTAAATAAATCAGAAATTTGGTGGGTCATTAAGCAGAGGAGTCTGCCAACATCTTTTAAGCTATACACAGGTTCAGCTTGGACAATACTATCAAGATCTTTTGCCGAGTATTGCATAGTGGGATGGGAAAATTTGCCAAGGACCCTCCTCCTCTACTATACCAACTTTGTGTCATCCCCAGAAGGATATTTCCAAACGGTTATATGCAACTCTCAAGACTACAAGAACACCACTGTTAATCATGATCTTCACTACATTGCTTGGGACAATCCTCCAAAACAACACCCCAGGTCTCTAGGACTAAAGGATTATAGGAAAATGATTCTTAGTAGCCGTCCATTTGCCAGAAAATTCAAGAGAAATGATCCAGTCCTTGATAAAATTGATAGAGAACTTCTGAAGAGGTATCATGGGCAATTTTCTTTTGGGGGATGGTGCTCTCAGGGCGTAAAGCACAGAGCATGCTCAGGTTTGGGAACTGAGAATTATGGTGTGCTCAACCCTGGTCCATCCTCAAGAAGGCTGAAAAATCTGCTAACAAAACTTCTCTCTGATAAATTTTTCACAAACAACAGTGCAGGTAATAATAACGATTTCCATTGA 1215 0.4206 MGLKIFMVSFMVTSILFFLLFIPTRLTIQISSLRPAVNYFSVPKSSKAYPVAFAYLISASKGDGGKLKRLLRVLYHPGNYYLIHVDYGAPEAEHRDMAEYVASDPVYGQVGNVWVVGKPNLVTYRGPTMLATTLHAMAMLLRTCQWDWFINLSASDYPLVTQDDLIQAFSELPRGINFIQHSSQLGWKLNKRGKPIIIDPGLYSLNKSEIWWVIKQRSLPTSFKLYTGSAWTILSRSFAEYCIVGWENLPRTLLLYYTNFVSSPEGYFQTVICNSQDYKNTTVNHDLHYIAWDNPPKQHPRSLGLKDYRKMILSSRPFARKFKRNDPVLDKIDRELLKRYHGQFSFGGWCSQGVKHRACSGLGTENYGVLNPGPSSRRLKNLLTKLLSDKFFTNNSAGNNNDFH 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1714 404 Coils Coil 394 404 - -
Ssu4g1714 404 PANTHER GLYCOSYLTRANSFERASE 1 394 IPR044610 GO:0015020
Ssu4g1714 404 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 1 394 - -
Ssu4g1714 404 Pfam Core-2/I-Branching enzyme 53 311 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1714 Ssu-Chr4 30294541 30299098 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1714 1 387 Glycosyltransferase AT4G27480 54.124 5.13e-151 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1714 - - gmx:100812712 740.725