Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1699 ATGTTGCTTATCAATGAAAAACAGAATCTGGTTCCACTCCAAATCCATCTCTTTGGTTCTCTATCCAGGTCCATGTCTGTAGCAGTTTCCTCACCAAAATGGCTGACCAATTGTGCTAAAGCATTCAAGTCAATtctatgttatgttgttttccTCATGTTTGATCTTCTTGACGCTGTTTTCTGCGTTATCTATGGATACCTTGATGAACGCATTGAAGGGGAGGCTTCCCCTTGTTGCTGTTCTATCTGGGAAAGGCAGAAGAGGAGGATGAATGTGACAAATGATGGTCTATCAGATAGCTTGTATGAGAGGAAGAACACTTTCAGAGAAATGGGGTTCCTTCAATTTGGGAGAAAACGGGAAGATTCCAATAGAAAATATGGTAGAGGTGGTGGAAGGTCAGTGAACCGTTGGTCTGATTGTGGCTGTGAGTCTTGCCTTTCGTGGGTGAATGATGATGGAAGTGACTATAAACTTCATTTTGTTGTGAAGGAGCCCTTGCTGGGTAGGGTAGTTCTACTAGTTTGGTTACtattatggacaaaacttagatgtagttcTATAGCCACTGGTGAGAACTTCAGGGGAAACCCTTTTGAGAATGTCATATTCTTGCACGGATTTCTTTGCTCTTCCTCATTTTGGACACAGACAGTGTTTCCGTATTTTTCTGAAAAAGTGAATCAGAAGTGCAGATTGATTGCCATTGACCTGCTGGGATTTGGCAAGAGTCCAAAGCCAAGAGATTGCTCATACACTTTGAAGGATCATGTGGAAATGATTGAGAAATCTGTGATTCAACCGTTGGAGTTAAGTAGCTTTCATTTGGTTGCACACTCCATGGGTTGCATAATTGCGTTGGCCCTGGCTGCAAAATACCCCAAGTGTGTAAAATCAATCACCCTTGTTGCTCCTCCATACACTTCTTCTGGGGGAAATGATGCTTGTCTAAATGCACTATCAATGCTTGTTGGAAAGAAATTGTGGTCCCCATTGTCATTTGGTTCTTCATTTATGTCATGGTATGAGCACTTGGGTCGAACTGTTTGCCTTGTCTACTGCAGAAATCACAGGATATGGGAGAGCATTCTAAAATTCATTACTCGCAAGAGGGATCTTCATTTCTTGACCATAGACATGACCAGGCACACCCATCATTCAGCTTGGAGTTCCATGCACAATGTGATATGTGGGGGAGCAAAATTTGTGGATGGTTACCTTATAATTTTGACCAAAGTTGGAGTCAGAATAAATGTGATTCAAGGTGATAAAGATCAGGTTGTCCCAATGGAGTGTTGTAGTAACTTCAAGTTGAAGGCACCTGATGCTGAAATCAACATCATTCCAAATGCAGACCACAGCACTGTAATAATGGGAAGAGAGAAGGAATTTGCATACAGTCTGGAGCATATGTGGGAATCTTGCTGTTGA 1434 0.4079 MLLINEKQNLVPLQIHLFGSLSRSMSVAVSSPKWLTNCAKAFKSILCYVVFLMFDLLDAVFCVIYGYLDERIEGEASPCCCSIWERQKRRMNVTNDGLSDSLYERKNTFREMGFLQFGRKREDSNRKYGRGGGRSVNRWSDCGCESCLSWVNDDGSDYKLHFVVKEPLLGRVVLLVWLLLWTKLRCSSIATGENFRGNPFENVIFLHGFLCSSSFWTQTVFPYFSEKVNQKCRLIAIDLLGFGKSPKPRDCSYTLKDHVEMIEKSVIQPLELSSFHLVAHSMGCIIALALAAKYPKCVKSITLVAPPYTSSGGNDACLNALSMLVGKKLWSPLSFGSSFMSWYEHLGRTVCLVYCRNHRIWESILKFITRKRDLHFLTIDMTRHTHHSAWSSMHNVICGGAKFVDGYLIILTKVGVRINVIQGDKDQVVPMECCSNFKLKAPDAEINIIPNADHSTVIMGREKEFAYSLEHMWESCC 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1699 477 Pfam alpha/beta hydrolase fold 203 306 IPR000073 -
Ssu4g1699 477 PANTHER LYSOPHOSPHOLIPASE BODYGUARD 4-RELATED 53 476 - -
Ssu4g1699 477 PANTHER HYDROLASE 53 476 - -
Ssu4g1699 477 PRINTS Alpha/beta hydrolase fold signature 291 304 IPR000073 -
Ssu4g1699 477 PRINTS Alpha/beta hydrolase fold signature 277 290 IPR000073 -
Ssu4g1699 477 PRINTS Alpha/beta hydrolase fold signature 231 246 IPR000073 -
Ssu4g1699 477 Gene3D alpha/beta hydrolase 192 476 IPR029058 -
Ssu4g1699 477 SUPERFAMILY alpha/beta-Hydrolases 197 456 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1699 Ssu-Chr4 29879693 29882169 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1699 41 476 Acyl Lipid Metabolism Gene Families AT5G17780 48.864 7.60e-142 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1699 - - ccaj:109802537 799.66